Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02090 ATGTCAACTTTCACTTTTTTTAAGAAGGAAAGGGAACTGCAGTCCAAAATTGAGGAACTAGAAGACAAGGTGGAGGAGTTCAGTAAGAACATTGCACTGCAAAAGCGAGGAAGTTCAAGAGGAGATTTCGGCGGTGCTGATAGAGTGTTGAACCAACTACTAACAGAGATGGATGGAATGTCTGATAAGAAAATAGTGTTCATCATTGGAGCAACAAACAGACCTGACATTATAGACCCTACATTGCTTCGGCCAGGACGTCTTGACCAATTGATATACATTCCTTTACCAGATGAGAGTTCACGTCTCCAGATCTTTAAGGCATGCTTGAGGAAGTCACCAATCTCAAAAGACGTCGATATTTTGGCTCTTGCTCGTTATACACATGGATTTAGTAGTGCAGATATTACTGAGATATCATCACGAGCTTTCAATCTGGTAAAGACAGTTCCGGCTAGAAACGGAAGCGATCGgaggagtgggtcgcggtggggaggcggagagagcttgacggtgaaagaggtctTAAGTAATCATAATAATGATCCTATATTGACAAATGGATTAAGAAAGTGA 576 0.3646 MSTFTFFKKERELQSKIEELEDKVEEFSKNIALQKRGSSRGDFGGADRVLNQLLTEMDGMSDKKIVFIIGATNRPDIIDPTLLRPGRLDQLIYIPLPDESSRLQIFKACLRKSPISKDVDILALARYTHGFSSADITEISSRAFNLVKTVPARNGSDRRSGSRWGGGESLTVKEVLSNHNNDPILTNGLRK 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02090 191 Gene3D - 41 96 IPR027417 -
Aip08g02090 191 Gene3D - 97 144 - -
Aip08g02090 191 CDD AAA 47 96 - -
Aip08g02090 191 PANTHER AAA-FAMILY ATPASE 30 146 - -
Aip08g02090 191 Coils Coil 10 37 - -
Aip08g02090 191 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 146 IPR027417 -
Aip08g02090 191 PANTHER CELL DIVISION CYCLE PROTEIN 48 HOMOLOG 30 146 - -
Aip08g02090 191 Pfam ATPase family associated with various cellular activities (AAA) 39 96 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02090 Aip-Chr8 75142136 75144862 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02090 36 143 Calmodulin-binding Proteins AT3G56690 46.296 1.83e-24 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02090 K13525 - aip:107611054 338.961