Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02085 ATGCAGATGCCTGTGGCGCGTGGAAAGCAGGGAGAGGGGAGAGGGGAGAGGGGAGAGTGCGCAACGGAAGCGGTGTGGGGCCAAAGAGATAGGTTAGGCGGAGTTGTCAAGAAGGTGGGTTTTCCGTATGGACCAGAAGAAATTTTTACCCAAACCTCCAAAGCACGAAGAAAACCCTCGCCATCGCAAAGATCAAAATCCGCCGTCTCACTATCGTCGCACGCCAGTCACCACTCACCCCCACTCACCAGTCACCGCCACACACGACTCACTACTCACCACTCACCACTGACCGTCGCTCCTCTTCGCCTTCCTGCTCTGATCGTCGCTGTGCCGCCCATACCATCGTCAATCTCTGCGCTTCTCGTCGTCCTCTCTGTGCTCACGGTGTCGATTAGTGTTGGTGTGGTGAGATCACACACAGAAGGCCCTAGAATCTATTCTATAGGAATCCCTCCATCTAACATTGGTGAGCAATTTGGTCAACTACTGAAAAGCGGAAGAGGAACTGATGTTAGTTTTGAAGTGAATGGAGAAATTTTTGCGGCCCATAAATTGGTACTAGCTGCACGGTCACCCGTTTTCAGAGCCCAAATTTGTGGTCCTGTGAAAGATCAGAATGTTGATTGTATAAACACTGGCTACAACTTTAGCATTAGCAGAGCAGCATCATTGTTTTCAGCTGAAAGCAGTCTGTCTCAAGTTTATTGCAACCTCCGAAAACCTCAGAGGATTTCTAAGGCTACAATAAATGAGTATTTAGAGAAGATTGATGCCATTGCATCCAAACTACTTAACTTTGAGATTGATGAAGAGCTTCTTCAGGAAGTGGTTAATATGGGATTTGACAGAAATCAATTGGTTGAATCTTTATGCAACAGGATCCAAAATGAGGTCTATGCCCTTCATTCTCTCCTTTCGTGTCTTCTTGATTATGGGGCTGGTGATGATTTGTTTAAAGAGCTATGGAGGCTGTGTGCAGGGCCATTAATGGATGTTCCTTGTGTTCAAGACAGATTTCTATTTCCCTCAGGGTCACATTGA 1044 0.4684 MQMPVARGKQGEGRGERGECATEAVWGQRDRLGGVVKKVGFPYGPEEIFTQTSKARRKPSPSQRSKSAVSLSSHASHHSPPLTSHRHTRLTTHHSPLTVAPLRLPALIVAVPPIPSSISALLVVLSVLTVSISVGVVRSHTEGPRIYSIGIPPSNIGEQFGQLLKSGRGTDVSFEVNGEIFAAHKLVLAARSPVFRAQICGPVKDQNVDCINTGYNFSISRAASLFSAESSLSQVYCNLRKPQRISKATINEYLEKIDAIASKLLNFEIDEELLQEVVNMGFDRNQLVESLCNRIQNEVYALHSLLSCLLDYGAGDDLFKELWRLCAGPLMDVPCVQDRFLFPSGSH 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02085 347 MobiDBLite consensus disorder prediction 47 92 - -
Aip08g02085 347 MobiDBLite consensus disorder prediction 1 24 - -
Aip08g02085 347 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 125 212 IPR045005 GO:0016567
Aip08g02085 347 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1-LIKE 125 212 - -
Aip08g02085 347 SUPERFAMILY POZ domain 147 211 IPR011333 -
Aip08g02085 347 Pfam BTB/POZ domain 161 211 IPR000210 GO:0005515
Aip08g02085 347 ProSiteProfiles BTB domain profile. 170 197 IPR000210 GO:0005515
Aip08g02085 347 CDD UBA_SnRK1_plant 269 306 - -
Aip08g02085 347 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 268 308 IPR015940 -
Aip08g02085 347 SUPERFAMILY UBA-like 257 307 IPR009060 GO:0005515
Aip08g02085 347 MobiDBLite consensus disorder prediction 54 79 - -
Aip08g02085 347 Gene3D Potassium Channel Kv1.1; Chain A 138 250 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02085 Aip-Chr8 73426757 73433151 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02085 314 345 B3 DNA Binding Superfamily AT4G23980 57.576 2.37e-06 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Aip08g02085 BTB 1.6e-09 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02085 K10523 - aip:107636513 203.371