Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02080 ATGGAGAAGGAGAAAGGGACTATCACTACGACCAACAATAACAACAAGATAGAGAGGGGGCACCAGATGTACCGTGAGGGGCGTTACAGGGAAGCATTAGGGTTTTACACGGACGCGATCGCCCTCGCTAAAACCAAACCCCACAAGATCGCTCTCCACAGCAATCGCGCTGCTTGTTACCTCAAACTTCACCATTTCAAAAAGGCAGCAGAAGAGTGTACCTCAGTGCTTGAGCTTGATCAAAACCACAGTGGGGCATTGATGCTGAGGGCTCAAACACTAGTCACCTTGAAGGAGTACCATTCAGCGCTTTTTGATGTCAATAGACTTTTAGAGTTGAACCCATCCTCAGAAGTATATCAAAATCTTCACGCTCGCTTGAAGACACAGTTGAGTCGGAAGAGGAGTTTGAAGAGCAGGAAGAAGAATCAGAAGACAGTCCTGAGGTCATACTAG 456 0.4715 MEKEKGTITTTNNNNKIERGHQMYREGRYREALGFYTDAIALAKTKPHKIALHSNRAACYLKLHHFKKAAEECTSVLELDQNHSGALMLRAQTLVTLKEYHSALFDVNRLLELNPSSEVYQNLHARLKTQLSRKRSLKSRKKNQKTVLRSY 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02080 151 Pfam Tetratricopeptide repeat 25 83 - -
Aip08g02080 151 SUPERFAMILY TPR-like 17 133 IPR011990 GO:0005515
Aip08g02080 151 MobiDBLite consensus disorder prediction 131 151 - -
Aip08g02080 151 Gene3D Tetratricopeptide repeat domain 9 136 IPR011990 GO:0005515
Aip08g02080 151 SMART tpr_5 84 117 IPR019734 GO:0005515
Aip08g02080 151 SMART tpr_5 50 83 IPR019734 GO:0005515
Aip08g02080 151 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 11 134 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02080 14 131 Calmodulin-binding Proteins AT3G25230 32.308 3.29e-13 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02080 - - aip:107613864 239.58