Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02070 ATGGATTATTCTTTCCCTGGTCAGGTTGTTGGTATTGAAGGGCATAATCCTAGTGGGAATTGCTTAGTTGCGTCTAAATTGGTAGATTCTATACCACCTACCTCTATTGCTGATGATAAGGATTTGAATCCAGCAAAGAAGCTAGCTATTGATAAAAGTCAACCAATTGATATTACTTCTAAAAGGATAGAGTTGTCCATGGCTTATGTGACACAAGATGACAACTTGATTGGGACACTAACAGTAAAAGAGACAATTTCATACTCTGCTCAGTTGTGGCTACCGGACAAGATGGCGCCGTCGGATAAGGAAGCACTTGTTGAGAGCACCATAGTGGCAATGGGGCTTCAGGATTGCACAGACACTGCGATTGGGAACTGGCACTTAAGAGGAATAAGTGGTGGAGAAAAGAGAAGGGTTAGCATTGCCTTGGAGATCTTGATGAGGCCTAGATTGCTCTTCCTTGATGAACCTACAAGTGGACTTTGCGAGTTCACATACCCTTGGTTTTACTTCTTGTTGGGATCCAATTGTGCTTGTTTTCATGCCAATTTTTCACCACTGGGCCAATTCTCCACCTGGGCACTTAACATTGCCCAAAGATCTGTTATTTCCATTCCCTACCCTGCTCCTGATGCTGAATGA 645 0.4326 MDYSFPGQVVGIEGHNPSGNCLVASKLVDSIPPTSIADDKDLNPAKKLAIDKSQPIDITSKRIELSMAYVTQDDNLIGTLTVKETISYSAQLWLPDKMAPSDKEALVESTIVAMGLQDCTDTAIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLCEFTYPWFYFLLGSNCACFHANFSPLGQFSTWALNIAQRSVISIPYPAPDAE 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02070 214 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 174 IPR027417 -
Aip08g02070 214 PANTHER - 63 163 - -
Aip08g02070 214 Pfam ABC transporter 6 160 IPR003439 GO:0005524
Aip08g02070 214 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 63 163 - -
Aip08g02070 214 Gene3D - 4 178 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02070 Aip-Chr8 69633326 69635192 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02070 5 77 Core DNA Replication Machinery Family AT1G67630 46.835 3.65e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02070 K05681 - bvg:104901399 171.4