Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02065 ATGAAGGCGTTCCTAGCACTGCAATTCGCGAGATTTCTCTCCTCAAGGAAATGCAGCACAGGAATATTGTTAGATAACTGGAGCGTGAAGGCCATCCGTAGAAAGACCACCGGCACTGGCAGGATGAGGTACCTCCGTCACGTTCCTTGCCGATTCAAGAGCGGCTTCAGAGAAGGTACTGAAGCTGCACCAAGGAAGAAGGGAGCAGCTGCATCTGGAGAAACTGTACATGGGAATCGTCATCATCTTGGTCAAGCTCTTCTGGAAGAAACCAGAGTAGCGTTACAAAGTCTGAAATCAAGGGGTATTCGATTCCCTGGCCGTGACAACGGGAGCTTGGCACCTATTTTCACTCCTCTGCGTTTGGTGTCTGAGGCTGAACTTGATCTTCCACACCAGACTCAGCATGATGATATTCCTGTGCAGAGTTTTACACCTGAACAAACTAAGGAAGCTTTTGATGTTGCTAGAAACAGCATTGAGCTTCTTTCTACTATGTTGTCTTCTTCTCCACAATAA 519 0.474 MKAFLALQFARFLSSRKCSTGILLDNWSVKAIRRKTTGTGRMRYLRHVPCRFKSGFREGTEAAPRKKGAAASGETVHGNRHHLGQALLEETRVALQSLKSRGIRFPGRDNGSLAPIFTPLRLVSEAELDLPHQTQHDDIPVQSFTPEQTKEAFDVARNSIELLSTMLSSSPQ 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02065 172 PANTHER TOM1-LIKE PROTEIN 1 96 172 - -
Aip08g02065 172 PANTHER TOM1-LIKE PROTEIN 1 96 172 IPR044836 GO:0035091|GO:0043130|GO:0043328
Aip08g02065 172 SUPERFAMILY GAT-like domain 103 171 - -
Aip08g02065 172 Gene3D - 11 65 IPR011331 GO:0003735|GO:0005840|GO:0006412
Aip08g02065 172 MobiDBLite consensus disorder prediction 56 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02065 Aip-Chr8 69404504 69405847 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02065 26 72 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 85.106 1.71e-22 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02065 - - aip:107624163 175.637