Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02056 ATGCTCTATTGTGCCTTTTACAGTTCTGCTTTTGAGAAATCAAAGTTTTACGGATTCGACAAGAAAGGGAACCGGTGGAAGGAGAGAACCGCAGGTACCGTCAAGTTTCCAAAGAACAAGGTTGCTTATTCTCTGATTCTTCAGTTCGATCTTGCCATGGCATTGCTATTTGTAATAGGATATGTAGGCATCATATTTGAGGAATCTCTAGCTTTCAACAAAAGTGGAGTAGGACTTTTGATGGCTGCTCCATCAATTGGTGTAGCTGTTTCTGAGCTAAGGCTTGCGTCTGCGGAAGTCAGTGAAATAGTGTTTTTCTTGCTTGGAGCTATGACTATTGTGGAAATAGTTGATGCTCATCAAGGATTTAAGCTAGTTACTGACAGTATAACAACTCGAAAGCCACGAATTCTCCTTTGGGTGGGACAAAAATACAAAATGTCTGATGAAGATGGTGAAGGTGATGGTGTTGATGCCATGGAAGATGAAGATGTTAGAGGATTTCAGTTTTAG 513 0.4074 MLYCAFYSSAFEKSKFYGFDKKGNRWKERTAGTVKFPKNKVAYSLILQFDLAMALLFVIGYVGIIFEESLAFNKSGVGLLMAAPSIGVAVSELRLASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDSITTRKPRILLWVGQKYKMSDEDGEGDGVDAMEDEDVRGFQF 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02056 170 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 48 141 IPR045016 GO:0006814|GO:0015297
Aip08g02056 170 PANTHER BNAC03G40960D PROTEIN 48 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02056 Aip-Chr8 68407630 68413785 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02056 50 141 Antiporters AT3G19490 75.490 3.94e-42 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02056 - - mnt:21410087 152.91