Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02040 atgaaaaaCTAcactagctctgatgagGTCATAAACCAAGCCATTGGTGACGAGGAGCTAGATCCCGAGGAGGGAATGTGTTTCGGCACATTAGAAGATGCGCGTGCATATTATTACCAATATGCGGCTAGGACTGGATTTGTCGTCAAAATAAGAACCACGGGCTGGAAGACTAGAAACGATCAGAGGGTGGTTATTAATCTGGCTTTACATTGTAACAGAGATGGATACCGCACATCCTGTGTAAAGGCACCCAAGAGAAGGAAAACGGTGGCCTCAATAAATTGCAAAGCCCGTTGCTATTTGGCATTAGATAAAATGACAGGGCAGTGGAGCATTTCTCTAGTAGAGGTATCCCACTTACACCCGCTTAATCCGACGCTATCTAGAATGTTCTCAGCAAACCGTAAGCTAAGTATGCATGTGAAAGACCTAATACAGCAAAACGATCAAGCTGGTATTAGACTGAGTAAGATGTACCAGGCACTAGCCAATGCCGTCGGTGGCCCTGCCAACCTCACCTTTACGGAGAACGATGTTAGAGAAGTat 550 0.4364 MKNYTSSDEVINQAIGDEELDPEEGMCFGTLEDARAYYYQYAARTGFVVKIRTTGWKTRNDQRVVINLALHCNRDGYRTSCVKAPKRRKTVASINCKARCYLALDKMTGQWSISLVEVSHLHPLNPTLSRMFSANRKLSMHVKDLIQQNDQAGIRLSKMYQALANAVGGPANLTFTENDVREV 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02040 183 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 137 - -
Aip08g02040 183 Pfam FAR1 DNA-binding domain 37 126 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02040 Aip-Chr8 64861370 64862702 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g02040 FAR1 2.1e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02040 - - ahf:112775207 313.538