Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02035 ATGAGAGATGAGGAGCCGTCACCAAACGCGTCGTCGCTGCTGGAGGAGCTTCGCTCTTCGCCACCGCCGAAGAGGGGAAAGAGGAGCTGCTCCCTCGCCAGTCATCGTCGTGCTTCCTGTTTTACAGATTCGACGGGGAAAGGAACCGGTGGAAGGAGAGAACCGATGGTGCCGTCAAGTTCCCTAAGAACAAGGTTAGTAGCAGGCTGTAAGCACTCCAAATCATTGAAAAAGGGTGCTATAACAAAGAGAATGACTGCAATTGAAGAAATGGCCGGAATGGATGTCCTATGCAATGATAAAACAGGCACATTAACTCTCAACAAGCTTACAGTGGACAAGAATCTAATTGAGGACATGGTTGTACTTATGGCTGCAAGGGCATCAAGGCTAGAGAACCAAGATGCAATTGATTGTGCAATTGTATCTATGTTAGCAGACCCAAAGGAAGTGATCAGCTTGCAATTACTAAGGAAACAGGAAGGCGTCTTGGAATGGGCTCTAACATATGGTTTTGCTGGTGTCTTTCCTGAGCACAAATATGAGATTGTGAAGAGGTTACAAGCTAGAAAGCACATTTGTGGGATGATTAGTGATGGAGTGAATGATGCACCAGCTTTGAAGATAGCAGACATAGGTATCGCTGTAGCAGATGCAACAGATGCTGCAAGAAGTGCCTCTAATACAGTTCTAACAGAACCTGGGTTGAGTGTGATCATAAGTGCTGTTTTAACTAGCCGTGCAATTTTCCAAAGAATGAAAAACTACACAATATATGATGTATCTATCACCATCCGTATTGTGGTTGGCTTTATGTTACTCACATGCATTTGGGAATTTAACTTTCCTCCCTTTATGGTTCTTGTCATAGCCATTCTCAACGATGGTATTACTATCTGCTCTCAAATACCATATTTAAAATGCATTATTTGGAGGTATTCTCTATAG 948 0.4335 MRDEEPSPNASSLLEELRSSPPPKRGKRSCSLASHRRASCFTDSTGKGTGGRREPMVPSSSLRTRLVAGCKHSKSLKKGAITKRMTAIEEMAGMDVLCNDKTGTLTLNKLTVDKNLIEDMVVLMAARASRLENQDAIDCAIVSMLADPKEVISLQLLRKQEGVLEWALTYGFAGVFPEHKYEIVKRLQARKHICGMISDGVNDAPALKIADIGIAVADATDAARSASNTVLTEPGLSVIISAVLTSRAIFQRMKNYTIYDVSITIRIVVGFMLLTCIWEFNFPPFMVLVIAILNDGITICSQIPYLKCIIWRYSL 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02035 315 PRINTS H+-transporting ATPase (proton pump) signature 228 253 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip08g02035 315 PRINTS H+-transporting ATPase (proton pump) signature 169 185 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip08g02035 315 PRINTS H+-transporting ATPase (proton pump) signature 197 213 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip08g02035 315 SUPERFAMILY HAD-like 86 240 IPR036412 -
Aip08g02035 315 Gene3D - 95 109 IPR023214 -
Aip08g02035 315 Gene3D - 170 234 IPR023214 -
Aip08g02035 315 PANTHER PLASMA MEMBRANE ATPASE 170 299 - -
Aip08g02035 315 PANTHER CALCIUM-TRANSPORTING ATPASE 75 151 - -
Aip08g02035 315 Gene3D - 235 300 - -
Aip08g02035 315 Gene3D - 77 94 - -
Aip08g02035 315 Gene3D - 110 151 IPR023299 GO:0000166
Aip08g02035 315 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 171 277 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip08g02035 315 PANTHER PLASMA MEMBRANE ATPASE 75 151 - -
Aip08g02035 315 ProSitePatterns E1-E2 ATPases phosphorylation site. 100 106 IPR018303 -
Aip08g02035 315 SUPERFAMILY Calcium ATPase, transmembrane domain M 77 297 IPR023298 -
Aip08g02035 315 Pfam haloacid dehalogenase-like hydrolase 169 211 - -
Aip08g02035 315 MobiDBLite consensus disorder prediction 1 61 - -
Aip08g02035 315 PANTHER CALCIUM-TRANSPORTING ATPASE 170 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02035 Aip-Chr8 63837539 63849335 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02035 171 296 Primary Pumps ATPases AT3G47950 90.476 3.11e-72 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02035 K01535 - aip:107607271 344.354