Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02022 ATGATAGGTGATGGTGTCAATGACCCCCATGCATTAAAGAGAGCAGAAATTGGAGTTGTTGTTGCTGATGCTACATACGCTGTTAGAAGTGCTTCTAATATTGTCCTCACTGAACCTGGTCTTAGTGTCATTATTAGTGCAGTGCTCACTAGCAGGGCAATTTTCCAAAGGATGAAGGACTATATTGTTCACATGCTGCAAAAAGAATTCAAGGAGATTGGACTATTGAAAAATGGAGGAAGTAGTTCCTACCACAAGTTGAACCCAACTTCTATAGAAAGTCTGCGGAAGCTTGAGGAACAACCTGAATGGTTGACAGGTGGAAAGCTCTGTGATTATCAGCTTGAGGCTGGAGGAgaaagagatacttaa 372 0.4059 MIGDGVNDPHALKRAEIGVVVADATYAVRSASNIVLTEPGLSVIISAVLTSRAIFQRMKDYIVHMLQKEFKEIGLLKNGGSSSYHKLNPTSIESLRKLEEQPEWLTGGKLCDYQLEAGGERDT 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02022 123 SUPERFAMILY HAD-like 1 58 IPR036412 -
Aip08g02022 123 PRINTS P-type cation-transporting ATPase superfamily signature 25 37 - -
Aip08g02022 123 PRINTS P-type cation-transporting ATPase superfamily signature 2 21 - -
Aip08g02022 123 PANTHER CALCIUM-TRANSPORTING ATPASE 1 65 - -
Aip08g02022 123 PANTHER PLASMA MEMBRANE ATPASE 1 65 - -
Aip08g02022 123 Gene3D - 40 72 - -
Aip08g02022 123 Gene3D - 1 39 IPR023214 -
Aip08g02022 123 PRINTS H+-transporting ATPase (proton pump) signature 2 18 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip08g02022 123 PRINTS H+-transporting ATPase (proton pump) signature 33 58 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02022 Aip-Chr8 62374191 62375541 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02022 1 64 Primary Pumps ATPases AT1G80660 78.125 4.18e-27 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02022 K01535 - csin:114304476 100.523