Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02017 ATGATTGGAAAAAAAAACAAATTTCTGCCGTTGGAGGAAAGTGATGCGGAGGTACAAATTTCGTCCAAAAATGACTCGATCGATGGGCATCTTGCGGAAAATATTGACACTAACTCTGATGAGGATTTATTGTATAAAGATGTCGCAAGCTTGAGTCCAGTTGATATAGTGAAGAAGGTATTTCGAAGTAAGGAGGACACGTATGAGTTCTACATGAGTTTAGGAAAATACCATGGATTCGGCATACGTAAAGGAGACTACCCGAAAGATGACGCTGGGAATATAATTAGGAGAAGGTTCTTCTACAATAGAGCCGGTTTGAGGGATGAAAACCACTTCAACAGGTTAGACAGGAAGAGATCGCATAAGCCTGAGACGCGTGCAAACTGTCAGGCCCTGCTCTCTATATACTTTGATAAGAGTATGTCAAGTTGGAAGGTTCAAAAGGTCACACTCGGGCACAACCATGAGTTGACACCTAAGGAGATGGTTCATATGATTCGTAAttttcattactattttcaaaaataa 531 0.3974 MIGKKNKFLPLEESDAEVQISSKNDSIDGHLAENIDTNSDEDLLYKDVASLSPVDIVKKVFRSKEDTYEFYMSLGKYHGFGIRKGDYPKDDAGNIIRRRFFYNRAGLRDENHFNRLDRKRSHKPETRANCQALLSIYFDKSMSSWKVQKVTLGHNHELTPKEMVHMIRNFHYYFQK 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02017 176 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 35 171 - -
Aip08g02017 176 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 35 171 - -
Aip08g02017 176 Pfam FAR1 DNA-binding domain 69 159 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02017 Aip-Chr8 61936402 61936932 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g02017 FAR1 3.5e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02017 - - aip:107633916 191.815