Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02007 ATGAAAGAAACCGTCGACCTAACTTTATCCCTACCCTATCGACGTCCTTTCACATACACAAAAACACAATCAAACGAGTTGTTCATCTCTCATTCAACGAGCTTCTCCGTCGCACGAGCTTCTTCTTCTCCTTTCCTCACTCACAGCGCCACCGCCGCCACCCTAACCACTGCAGCTACCTTCTCCTTCTTCTACTCTCTTTTAAATACTGAACCAGTAGAACACAGCCCCTGTCTCTCTCGTTCTTTCTCGTTCGTAGAACAAATCAAGCTCAAGCTCCTGTTCTCTTCGTATCAGGTGAGCTCCAGCACGCCGGCGCCACCTGTAGCAGTGTTTGTCCCCACCACCGTCGCGCCTCTCTCTCCTTTTATTCCCACTCAGTTCTGGCTCGAATATCTTTTTAGCGCCGCGGCCATCATCTCCTCCAGTCAATGCTTCCAGATAGAAAGAAAGCAAAAAGGAAAAGATGTTGAAGGTGAAGAATTCGACAAGATTAAAGTTGAAATCTCTAAAAGACAGCAGTTATCTCCCGAATTTGCAGCTATCAACCCTTTCAAGAAACTCCCTGCTATTGTTGATGAAAGGTTCAAGCTATTCGAGAGTCACGCAATTCTTATCTATCTTGCTTCTGCCTTTCCTGGTATTGCTGATCATTGGTTGGATGTATGGTGTGGCCCTGGAATTGGACTCGCATCAGATCATGCTTCTACTTCTGTGGATTGTGTGGTGGCAAGGAAGAATGCTTCTTCAAGAAGGAACCTTGATGCTGTTGAGAGAGCAACACATAAGGAAGAGCTTGTCTTCCAAATTGTTGGATTCTCAGGAGCAGATATAAGAAACCTTGTCAATGAAGCAGCAATAATGATGGTAAGAGCCACCCTCAATGCAGTTGAGGAAGTCATAGAAGAAAGAGATCTCGATCCCTTATTTTCAGACAGGTATACTTTATTTTGGATAATGCTACTACTTAGCAAGCTTGCATTCAGCTACTATGTGGAGTCAGGAGATGTCAAGATTAACTTTCAATGTGAAGCTTGA 1038 0.4451 MKETVDLTLSLPYRRPFTYTKTQSNELFISHSTSFSVARASSSPFLTHSATAATLTTAATFSFFYSLLNTEPVEHSPCLSRSFSFVEQIKLKLLFSSYQVSSSTPAPPVAVFVPTTVAPLSPFIPTQFWLEYLFSAAAIISSSQCFQIERKQKGKDVEGEEFDKIKVEISKRQQLSPEFAAINPFKKLPAIVDERFKLFESHAILIYLASAFPGIADHWLDVWCGPGIGLASDHASTSVDCVVARKNASSRRNLDAVERATHKEELVFQIVGFSGADIRNLVNEAAIMMVRATLNAVEEVIEERDLDPLFSDRYTLFWIMLLLSKLAFSYYVESGDVKINFQCEA 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02007 345 SUPERFAMILY Thioredoxin-like 159 214 IPR036249 -
Aip08g02007 345 Pfam Glutathione S-transferase, N-terminal domain 160 209 IPR004045 -
Aip08g02007 345 Gene3D Glutaredoxin 148 219 - -
Aip08g02007 345 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 130 216 IPR004045 -
Aip08g02007 345 PANTHER GLUTATHIONE S-TRANSFERASE T1-RELATED 159 219 IPR043377 -
Aip08g02007 345 Gene3D - 240 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02007 Aip-Chr8 60966289 60971969 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02007 157 219 Glutathione S-transferase Gene Family AT5G41210 68.254 1.21e-24 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02007 K00799 - ahf:112747943 157.532