Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02004 ATGTTACCGGAGAACTTCAAAGAACAGCATGCTTTGTCTGTGAGAAGCATCCAGTGGAGCTATGCAATATTCTGGTTTACTTCATCTACCCAACCCATGGTGTTGAGTTGGGGGGAAGGATATTACAATGGAGACATTAAGACAAGGAAGACAGGTCAAGGAGTGGAACTCAATTCTGATCAGATAGGGTTGCAGCGGAGTGAGCAGCTTCGAGAGTTATACAAGTCCCTCAAAGCTGTAGAAGCCAGCCCTCAAACCAAAAGGCCTTCGGCAGCACTGTCTCCGAAGGATCTCACAGATACAGAATGGCTATAA 315 0.4635 MLPENFKEQHALSVRSIQWSYAIFWFTSSTQPMVLSWGEGYYNGDIKTRKTGQGVELNSDQIGLQRSEQLRELYKSLKAVEASPQTKRPSAALSPKDLTDTEWL 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02004 104 MobiDBLite consensus disorder prediction 80 104 - -
Aip08g02004 104 PANTHER TRANSCRIPTION FACTOR EGL1 5 103 - -
Aip08g02004 104 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 13 103 IPR025610 -
Aip08g02004 104 PANTHER TRANSCRIPTION FACTOR TT8 5 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02004 Aip-Chr8 60437416 60438094 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02004 2 103 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 63.889 4.55e-38 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02004 - - ahf:112732736 190.66