Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01987 ATGGCTTTCCGTGTCTCTTGCTCGGTGTCGGAGCTCGGAGGCGGCAACTGTTTTCTGCGTCTCTTGCTCGGTGTCGATGTCGGTCTTGCCCTTGTTGAAGGAATAGTTGCTTCGTTGCGTTGTTTCAGGGACTGGTATAACCTTGAGAAGTCGAAGCAGGTGAAGGCATTTCGTTGTGGAGAGTATGATGAGTGCATCGAGAAGGCGAAGGCATCTGCTGCTAATTCGAATAAGAAGGCGGATTTTCTTAGCTTGGTGGAGAAATTTTACTATCTCTCTGGCAGATATGACATTGAGCTGACTGTTGGTGATGCTGTCATAGAGAACTCTTTCTTACGGCCACTTGGCCATCTTGAATTAGATCTTCCAGAAGTACCTACTATCAAGGCACCCCGTCTTCCTCCACTAGCTATTGATCCATACACGAGATATGGGCCCAAAGCAGAGATAACCCACTTATTCAGGACTCCTGAAAGTAAAGTTGCTGTAGAAGGGAGAGTTCAGTTTGATCTGCTCCAGGTCAGCTTCACCGGTTCGATGGAGGTAGGCCGTGAAATAATGCATGCTGCAGCTAGCAGCAACTTGAAACAAGTTTCACTTGAATTAGTAGGAAAGTCACCTCTTTTAATCTTTGATGATGCTGATGTAGATAAAGCTGCTAGCCTTGCTCTCTTGGGCATAGTATATAACAAGGCATTTTTTTCTTCCTCTTTCACACCCTGCAGGAATGCTATTGATTCCTCTTTATTCAAGCAATGGTTGCATAACTTGCAAAGTGGGATTGGGATTCTAGCTGATGGCACCTTGGCTCTGAGATAA 819 0.4554 MAFRVSCSVSELGGGNCFLRLLLGVDVGLALVEGIVASLRCFRDWYNLEKSKQVKAFRCGEYDECIEKAKASAANSNKKADFLSLVEKFYYLSGRYDIELTVGDAVIENSFLRPLGHLELDLPEVPTIKAPRLPPLAIDPYTRYGPKAEITHLFRTPESKVAVEGRVQFDLLQVSFTGSMEVGREIMHAAASSNLKQVSLELVGKSPLLIFDDADVDKAASLALLGIVYNKAFFSSSFTPCRNAIDSSLFKQWLHNLQSGIGILADGTLALR 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01987 272 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 173 203 IPR016162 GO:0016491
Aip08g01987 272 PANTHER RIBOPHORIN II 79 164 IPR008814 GO:0006487|GO:0008250|GO:0016021
Aip08g01987 272 Pfam Oligosaccharyltransferase subunit Ribophorin II 78 160 IPR008814 GO:0006487|GO:0008250|GO:0016021
Aip08g01987 272 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 204 231 IPR016163 GO:0016620
Aip08g01987 272 Pfam Aldehyde dehydrogenase family 173 231 IPR015590 GO:0016491
Aip08g01987 272 SUPERFAMILY ALDH-like 174 232 IPR016161 GO:0016491
Aip08g01987 272 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 2 79 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01987 Aip-Chr8 58800002 58802612 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01987 168 232 Aldehyde Dehydrogenase Gene Family AT3G24503 72.308 1.29e-22 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01987 K12667 - ahf:112775503 390.193