Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01982 ATGGTCATGAAGCTCTTTAGTTTGGAGTTTAAAACAAAATTGCAACCCTATTTTCAATTAGAAACCCTAACTCCAACAATTAGAAACGAAGAAAGAAGAAAAGGGGGAGGGGGGAGTCCGAGGGAGAAGGGAGATCGGGAAGGGAGGAGGGACCGTGCTGCGTCCTGCCGCCGCACCACCATCACCAGAGAGAGAGAGAGAGATCTAGAAAAAGCAGAGGAGAGCAGAGAAGAAGATCGCGTCGGCGCGCTGGGCCTCACCGTCGCCATCGCGTCGTTGTCGGACTGTGGAGAGAGAGAGAGAGCGTTCGCGGAGGGAGCCATGGGAGAGAGTGACGAGCGCAAGCCAGGACTGGGAGGGAGAAGGCACCGTCGTGCATCCTCGTTGCCGTCGCTGGAGATCTGGTCGTCGCCGCCGATCGTCCTTGAGCCGCGTCGGAAACAGAACTGCGAACGGAAGGGAGCGCGAACCATAGCCACGGACGGAGAAGAAAGAGCGCGCGCGGAGGAGGTGAAGCCGTCGTTGTCACCGTTGCGTGTGGAGTCGCCGCCGCGCCTGGTCTCCGTTGCTGCTGAGCCGCTGTTCCTGCCGCCGTCAAGCCTCGGAATTCCATTTATTTTCAATACATGGATTGTAAGGCATCTTACACAAGAGGACTATGCGGATAAGATGTCTCATAGGAAGTTCGATCACCCAAGACACGATTCTCTTGGCTTTCTTCCAAGGATGCCAGCTTCTTGTTATCATGGAAAAGGTTATCTAGGATCCTTGCCAAAGGCTGGAGGGTTTCCTCCTCTTAGTGCACATGGGCCTTTTCAACCTACTCCAACACCTGTGCCAACACCCCTGGCTGGTTGGATGTCAAATCCTACCACTGTAGCACATGTTGCAGTTTCTGGAAGAGCCACTATAGGTCTTGGTACTGCTACAGGTCTTGGTGCACCATCAATCACTGACATTGAAGCAGTAGAGGAAATTAACTTTTCAGTTTCTGAAGTGAAGAGCAACTACAAGGAACCCTTTGTCAACATCCCAGAGGGTACTATTTGA 1050 0.5295 MVMKLFSLEFKTKLQPYFQLETLTPTIRNEERRKGGGGSPREKGDREGRRDRAASCRRTTITRERERDLEKAEESREEDRVGALGLTVAIASLSDCGERERAFAEGAMGESDERKPGLGGRRHRRASSLPSLEIWSSPPIVLEPRRKQNCERKGARTIATDGEERARAEEVKPSLSPLRVESPPRLVSVAAEPLFLPPSSLGIPFIFNTWIVRHLTQEDYADKMSHRKFDHPRHDSLGFLPRMPASCYHGKGYLGSLPKAGGFPPLSAHGPFQPTPTPVPTPLAGWMSNPTTVAHVAVSGRATIGLGTATGLGAPSITDIEAVEEINFSVSEVKSNYKEPFVNIPEGTI 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01982 349 PANTHER TOPLESS-RELATED PROTEIN 1-RELATED 251 310 IPR027728 GO:0006355
Aip08g01982 349 MobiDBLite consensus disorder prediction 103 126 - -
Aip08g01982 349 PANTHER TRANSCRIPTION FACTOR WD40-LIKE FAMILY-RELATED 251 310 - -
Aip08g01982 349 MobiDBLite consensus disorder prediction 28 80 - -
Aip08g01982 349 MobiDBLite consensus disorder prediction 103 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01982 Aip-Chr8 58229153 58235920 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01982 224 259 Cytoplasmic Ribosomal Protein Gene Family AT1G61580 63.889 2.30e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01982 - - ahf:114925388 149.443