Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01981 ATGTTTGCTCTCTTGTTCTGTTTGAAGCATCCCCCGCGTGTTCAGTCTCGCTGCATCCCGCGAGTGCTGGAGGGCCGCCACGTGCTCGACATCGATGAAACTGGCAGCGGCAAGACCGCCGCTTTCGCCCTCCCAATCCTCCACCGCCTGTCGAAGCACCCGTTCGGTGTGTTCGCATTGGTGGTGACGCCCACTAGGGGACTGGCGTTCCAGCTAGCAGAGCAGTTCTGCTTAACTGAGATAATTAGCAATTCCAAACAGCCATCTGAATGGCATCCAAAGAGCCACTGGTGA 294 0.568 MFALLFCLKHPPRVQSRCIPRVLEGRHVLDIDETGSGKTAAFALPILHRLSKHPFGVFALVVTPTRGLAFQLAEQFCLTEIISNSKQPSEWHPKSHW 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01981 97 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 19 97 IPR014001 -
Aip08g01981 97 PANTHER RNA HELICASE 8 78 - -
Aip08g01981 97 PANTHER ATP-DEPENDENT RNA HELICASE DDX49-RELATED 8 78 - -
Aip08g01981 97 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 77 IPR027417 -
Aip08g01981 97 Pfam DEAD/DEAH box helicase 13 76 IPR011545 GO:0003676|GO:0005524
Aip08g01981 97 Gene3D - 5 86 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01981 Aip-Chr8 57559060 57559353 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01981 8 76 Eukaryotic Initiation Factors Gene Family AT5G11200 40.580 9.33e-12 57.8