Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01955 ATGCCGCTGGGCTGCCAGGTGGGGTGGTGTGTGGGGAGTGCTTTGGGCTTGTCTTCAGCTGGCCCAATAGCTATGCAGGGGAGAATTGGGCTGGAGGGGGAAAATTGTGCGTGCAGGGTGAGTGGGGAAAAGGCTGGGCGGGAGATTGGGACAGAGGTAGCAATGGGCCAGAGTTGGGATCGGGTTACAAGGGATCGTGGCCCGGTTCCCCTTAGTGGCACGGGCGGGTCTGGGGATCCGACACGGAGCCAGCCGTCTCGCGTGTGGATTGCAACGGCGCCCCTGGATGGTGGGCGAGTTTGGCCAGGATACCCAGAAGAGCGTGCGGCCGATCTGGGAGGTGTGGGGACAAGTGCGGGGCGTTCGGTGGTGGTGGAGACTCGCGATGTGGAGGAGGTGGTGGTGGGAGTTGAACCGTGCGCGGGGGAGGATGTTCAGCGCGTCATGGTGAGTGGGTCGCAGTGGGGGATGTCCGCCAGAGGGCCAGGCCAGGGGAAGGATCAGGAAGCCCAGGAAGGGGAACCTCCAGGCTTGATTGATGATAGGCAACGCGACACAGGGAGCATGATACCGCAGACAGGGGATGTAGGGACCGTGGACGAGCATGGCAACCCAGAGGATGACACTCAGGATGTGGATGCCGGTGTTGATCCTGGGCGGGTAGGATTCGGGAAGAAAACGGCAACATGTGAGCAGGCAGCAGGGGATGAGTGCAAGGGTacacgggaagagcagATCTCTCGAGCACATATTATAACCCCTGGTCTCTCTCTCCCCCTACATAATATTTTCTTATATATAAAGTCAGTGTTACCAATTGTCTCTGGACAACCAAAATACATGATCGGTTCGGAAATCGAGATCCCAACCCACTTCGATCCATTCACTGAGGCCAAAGAATTGGGTGGCGTAGGGGCAAAGGAATATATCCATATCCGCATCCAGCAGAGGAATGGGAAGAAGAAACTGACCACAGTGCAAGGCTTGAAAGAATTGGGCTTAGAGAAGATACTCAAAGATCTCAAGAAAGAGTTATGTTGCAATGGCAATGTGGTTCAAGACAAGGAGCATGGCAAGATAATCCAGCTTCAAGGTGACCATCGCAAGAACGTTTCCCAATTGTTGGTTCAGGCTGGTCTTGTTATGAAGGATCAGATCAAGATTCATGGTTTTTGA 1176 0.5425 MPLGCQVGWCVGSALGLSSAGPIAMQGRIGLEGENCACRVSGEKAGREIGTEVAMGQSWDRVTRDRGPVPLSGTGGSGDPTRSQPSRVWIATAPLDGGRVWPGYPEERAADLGGVGTSAGRSVVVETRDVEEVVVGVEPCAGEDVQRVMVSGSQWGMSARGPGQGKDQEAQEGEPPGLIDDRQRDTGSMIPQTGDVGTVDEHGNPEDDTQDVDAGVDPGRVGFGKKTATCEQAAGDECKGTREEQISRAHIITPGLSLPLHNIFLYIKSVLPIVSGQPKYMIGSEIEIPTHFDPFTEAKELGGVGAKEYIHIRIQQRNGKKKLTTVQGLKELGLEKILKDLKKELCCNGNVVQDKEHGKIIQLQGDHRKNVSQLLVQAGLVMKDQIKIHGF 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01955 391 CDD eIF1_SUI1 308 390 IPR005874 GO:0003743
Aip08g01955 391 SUPERFAMILY eIF1-like 280 391 IPR036877 GO:0003743|GO:0006413
Aip08g01955 391 MobiDBLite consensus disorder prediction 155 216 - -
Aip08g01955 391 PANTHER PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG 281 391 - -
Aip08g01955 391 MobiDBLite consensus disorder prediction 62 85 - -
Aip08g01955 391 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 281 391 - -
Aip08g01955 391 Pfam Translation initiation factor SUI1 307 379 IPR001950 GO:0003743|GO:0006413
Aip08g01955 391 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 286 391 IPR005874 GO:0003743
Aip08g01955 391 Gene3D - 276 391 - -
Aip08g01955 391 ProSiteProfiles Translation initiation factor SUI1 family profile. 310 379 IPR001950 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01955 Aip-Chr8 54926069 54932433 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01955 281 391 Eukaryotic Initiation Factors Gene Family AT5G54940 72.321 1.05e-48 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01955 K03113 - ini:109190435 164.851