Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01954 ATGGCAGCTACGGTTAACTTGTGTGAAAATATTGATGCAGAGAATGCAGCAATAATGAATAGTTTCATTGAAGAACAAGAGGGGCATCTAGAGCTTCCATTGTTTGATCTATCTGGTTTAGCTAATGCTACTGGTAACTTTTCAATAAAAAACAAGTTTGGAGAAGGTGGTTTTGGACCTGTATACAAGGGATTATTGAAAAATGGGCAAGAAATTTCTATTAAAAGACTTTGTAGAGGTTCTGTACAAGGGCTTAAAGAATTCAAAAATGAAATTGCACCGATTGTCAAACTTCAACATCGTAATCTTGTGAAACTTCATAGATATTGCATTCACAATGAAGAGAAAATGCTTGTATATGAATACATGCCCAAAAAAAGTTTGGATTTCTTTATATTTGATCAAACACGGAGAAAGTTCTTGGATTGGTTGAAGTGTTTTCGTATGATTTTTGGGATTGCAAAGGGTCTCCTTTATCTTCATCGAGATTCAAGACTTAGAATCATTCACAGAGATTTTAAAGCAAGTAATGTCTTACTTGATAGTGAAATGAATCCTAAAATCTCAGATTTTGGTTTGGCTAGAATTTTAGGAGGTGACCAAATTGCAGCAACAACGCGACGAGTGGTTGGAACATACGGATATATGGCACCTGAATACGCAATAGATGGAAACTTGTCAGTAAAATCTGATGTCTTTAGCTTTGGCGTTTTGTTACTGGAGATACTATCCGAAAAGAAAAACAAAGGAAATCATTGGGAAAATGAAAGCACAGATCTTATTGGCTATGCATGGGATTTGTGGACTAAAGAAAGGCCTCTAGAAACTGTTGATGATATTCTAATAGAGTCTTGTAACCTCTCTCAAGTATTGAGGTGCATTCATATTAGTCTTCTCTGTTTGGAGCAACATCCATATGCTAGACCAGACATGTCATCAGTGATTATGATGTTTGGAAGTGAAATTGCCTTGCCTAAGCCAAAACGACCTGCTCTATTTATTGGAGAATATGCATATCAATATGATCCTGCCAACGAATTCAGTATCGAAGTCCTAGAATCTAGATGA 1068 0.3605 MAATVNLCENIDAENAAIMNSFIEEQEGHLELPLFDLSGLANATGNFSIKNKFGEGGFGPVYKGLLKNGQEISIKRLCRGSVQGLKEFKNEIAPIVKLQHRNLVKLHRYCIHNEEKMLVYEYMPKKSLDFFIFDQTRRKFLDWLKCFRMIFGIAKGLLYLHRDSRLRIIHRDFKASNVLLDSEMNPKISDFGLARILGGDQIAATTRRVVGTYGYMAPEYAIDGNLSVKSDVFSFGVLLLEILSEKKNKGNHWENESTDLIGYAWDLWTKERPLETVDDILIESCNLSQVLRCIHISLLCLEQHPYARPDMSSVIMMFGSEIALPKPKRPALFIGEYAYQYDPANEFSIEVLESR 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01954 355 SUPERFAMILY Protein kinase-like (PK-like) 31 334 IPR011009 -
Aip08g01954 355 Gene3D Phosphorylase Kinase; domain 1 8 122 - -
Aip08g01954 355 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 15 341 - -
Aip08g01954 355 Pfam Protein tyrosine and serine/threonine kinase 48 315 IPR001245 GO:0004672|GO:0006468
Aip08g01954 355 ProSiteProfiles Protein kinase domain profile. 47 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01954 355 Gene3D Transferase(Phosphotransferase) domain 1 123 323 - -
Aip08g01954 355 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 15 341 - -
Aip08g01954 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01954 Aip-Chr8 54910785 54912233 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01954 35 343 Receptor kinase-like Gene Family AT4G05200 53.871 1.40e-119 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g01954 PK_Tyr_Ser-Thr 9.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01954 - - adu:107462330 627.476