Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01950 ATGTGTAAAGAAATTTCTGGACAGCTCAAAGCCTTAAAGTTGAAAAGACATTTTCTCATTCATACAGGGGAAAGAGATTTTGTGTGTCCTCATGAAGGTTGTGGTAAGGTTGGGGAGGCTATACCACTAAGTGATGCTTCAGTGGATGCAGTCGTTGGAACGCTTGTATTGTGTTTTGTTAAAGATATTGATTTGGCATTAAAAGAGAGGAGCTTACAAGTTACAGCAAAGAAGAGTATTTACTCAATCATTACTGTACTTATTAGTTTACCTGTGGCACTTGAACTCAGTAAGAAGACAGCTAGCGATGCGATGACTCCTATATCTGACACATTTACCGTTGATATTAATTCCAAACTTGATAGGGAGCTGATGAATCTAATATTGGAGAGGGGACACAGCAGAGTCCCGATCTATTATGAGCAGCCTACAAATATTATTGGACTTATACTGGTACTGATTTTCCTTTGTTATTATTCACCTTTACTATTTAACATTCTTGGATTCATATTGAGTTCTATTGAACTTGGTACTAATTGA 540 0.3685 MCKEISGQLKALKLKRHFLIHTGERDFVCPHEGCGKVGEAIPLSDASVDAVVGTLVLCFVKDIDLALKERSLQVTAKKSIYSIITVLISLPVALELSKKTASDAMTPISDTFTVDINSKLDRELMNLILERGHSRVPIYYEQPTNIIGLILVLIFLCYYSPLLFNILGFILSSIELGTN 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01950 179 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 92 153 IPR045095 GO:0010960
Aip08g01950 179 PANTHER AND COBALT EFFLUX PROTEIN CORC, PUTATIVE-RELATED 92 153 - -
Aip08g01950 179 SUPERFAMILY beta-beta-alpha zinc fingers 13 36 IPR036236 -
Aip08g01950 179 SUPERFAMILY CBS-domain pair 91 163 IPR046342 -
Aip08g01950 179 Gene3D - 90 161 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01950 Aip-Chr8 54870329 54871653 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01950 9 37 C2H2 Transcription Factor Family AT4G06634 65.517 4.98e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01950 K16302 - gmx:100808328 111.309