Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01925 ATGGCATTATTGGAAAATTGGTTCCACATGATCATGGTGATGATGTTTTTCCATGGCATAGTGTTTGTGAGTTCAATCAATGAAGAAGGTTCAAGCCTTTTGCAGTTCAAAAGTTCCCTTTTTGATGCAAATAACAAGCTTCACAATTGGGATTCTTCTGACTCCACACCATGCAATTGGACTGGTGTGCAATGCACCCATTCATCATTGGTAACTTCTGTTAAACTCTACCACCTTAATCTTTCTGGCACTTTATCTCCTAGAATCTGTGACCTTCCAAGGCTAATTGAGTTGAATCTCTCAAAGAATTTCATTTCTGGTCCAATTCCTGATGGTTTTGCTAATTGCCATAGTTTGGAGATTCTAGATCTTTGTACAAACCGGCTCCATGGAGAAATTCTAACCCCAATTCGGAATATAACAAAACTTAGGAAGCTTTACCTTTGTGAAAATTATATGTATGGTGAGGTACCTGAAGATCTTGGGAACTTAGCTTCACTTGAGGAGTTAGTTATATATAGCAACAACTTAACTGGGATCATTCCTAAATCAATTAGCAAGTTGAAGAAGCTTAGGGTTATTCGGGCGGGACTGAATGCTCTCTCAGGGCCAATACCAGCTGAGATTAGTGAGTGTGACAGCTTGGAGACATTGGGTTTGGCGCAGAATCAGCTAGAAGGTTCTATTCCAAGAGAGCTTCAAAAGCTTCAGAACCTTACCAACTTGATTCTATGGCAAAACTCACTGTCCGGGGAGATTCCTCCCGAGATTGGGAACATTAGTAACCTGCAATTGCTTGCCTTGCATATGAATTCGTTTGTCGGTGATGTCCCGAAGGAGCTCGGAAAATTGTCGCAGTTGAAGAGGTTGTACATATACACCAACCAGTTGAATGGAACAATTCCACCAGAGCTAGGGAACTGCACAAATGCTATTGAGATAGATTTTTCGGAGAACCGTTTGGTTGGGTTCATTCCCAAAGAGTTGGGGAAGATGTCTAATCTTACCTTGCTTCATTTGTTTGAAAACCATTTGGAGGGTCATGTTCCTCATGAGCTTGGCCAATTGAAGCAGCTAAAGAATCTAGACCTTTCAATGAATGAGTTAACAGGTACAATTCCATTGGAGTTTCAAAATCTTTCATTGATGGAGGATTTGCAGCTATTTGACAACAAGCTTGAGGGAACGATTCCTCCTCATCTTGGGGCCATTAAGAACCTTACAATTCTCGATATGTCTTCGAATAATTTTGTTGGTCCAATACCTGTTCATCTATGTCAATATCAGAAGCTGCAGTTCTTGAGCCTTGGGTCGAATCGGCTGTCCGGAAATGTTCCCTATAGGCTGAGGACTTGCAAATCTCTTGGGCAGCTAATGTTGGGGGACAACATGTTGACAGGAAGTTTACCAGTTGAGTTGTATGAACTTCACAATCTTACTGCACTCGACCTTAAACAGAACCGATTTTCCGGGCTGATAAGCCCAGGGATAGGTCAATTAAAGAAATTGGAAAGGCTTCTCTTGTCGGATAATCATTTTGAAGGTTATCTCCCTTCTGAGATTGGAAATTTATCACAACTTGTCGCGTTCAATATTTCCTCCAACAGTTTCAGTGGAAGCATTCCACGTGAATTGGGAAACTGTGTAAAGCTACAGAGGCTTGATCTTAGCAGGAACAACTTCACTGGTGAGCTTCCAGAAAAAATTGGCAAGCTGGTGAATCTGGAGCTGTTGAAAGCTTCCGATAATAGGCTCTCTGGTGAAATACCTGGCAGTTTGGGGAATCTTATTCGCCTCACGGAGCTTGAGCTAGGTGGCAACCTATTCTCAGGAAGCATCCCTTTTCATTTGGGAGGACTTACTTATGTTCAGATCGCACTTAACTTGAGCCACAACAATCTTTCTGGTACGATTCCTATAAGCTTGGGGAACTTGCTAATGTTGGAATCACTTTACTTAAACGACAATCAACTCATTGGTGAGATTCCTGAATCAATCGGTAGCCTTCCTAGCCTTATAGTATGCAATGTCTCCAACAACAAGCTGGTAGGAACTGTTCCAGATAAACCTGCATTTAGAAAGATGGATTTCTCAAATTTTGCCGGGAACAATGGGTTATGCCGATTAGGTACTTATCATTGTCATCCACCTGTATCTTCAACTCATTCAGCGAAAGCAAGCTGGATCAGAGATGGTTCAACTAGGGAAAAGATAGTTAGCATTGTTTCTGGTGTGGTCGGATTTGTTTCTCTTATTTTCATAGTAGGTATATGTTACGCCATGAGGCGGCGTAGCCCTGCTTTTGTGTCGCTTGAAGGGCAAACAAGACCTCATGTCACTGATAACTATTATTTTCCGAAAGAAGGCTTTACATACCAGGATCTCTTGGAAGCCACCGGAAATTTTGCAGAATCAGCGGTTATAGGAAGAGGAGCTTGTGGCACTGTCTACAAGGCTATTATGAATGACGGCGAAGTGATTGCAGTGAAAAAGCTGAATTCTCGAGGAGATGGAGCAAACGTTGACCGAAGCTTCCTTGCTGAGATTTCAACCCTTGGAAAAATCAGGCATAGGAACATTGTGAAGCTGCATGGATTTTGTTATCACGAGGATTCGAATCTTCTCTTATATGAATACATGGAAAACGGAAGCCTTGGGGAACAACTTCACTCAAATTCAAGCAGGTGTGTGCTGGATTGGAGTGATCGATATAAAATTGCTTTGGGAGCAGCAGAAGGCCTATGCTATCTTCATTTTGATTGCAAACCTCAAATCATTCATCGCGATATAAAATCAAACAACATATTGCTTGATGAATTGTTTCAGGCTCATGTTGGAGACTTCGGCTTGGCAAAGTTGATTGATTTTTCCTACTCGAAATCCATGTCTGCTGTGGCAGGTTCATATGGCTACATTGCCCCAGAGTATGCTTACACCATGAAGGTGACTGAGAAATGTGACATCTATAGCTTCGGGGTAGTTTTGCTAGAACTAGTCACTGGGAGGTCACCTGTTCAACCATTAGAACAGGGCGGCGATCTGGTGAGTTGGGTGAGAAGGTCGATTCAAGCTTCAGTACCGACATCCGAACTGTTTGACAAGCGATTGAATCTGAGCGTGCAAAGAACAATGGACGAGATGTCTCTTATTCTGAAAATCGCTCTGTTTTGCACCAGCACGTCCCCGCTTACTAGGCCAACAATGAGAGAGGTCATTGCAATGTTGATTGATGCTAGAGAATATGTCAGCAATTCACCATCCACTCCTACATCGGAATCTCCACTTGATGAAGGTTCTTCTTCTAAAGGTTAG 3312 0.4233 MALLENWFHMIMVMMFFHGIVFVSSINEEGSSLLQFKSSLFDANNKLHNWDSSDSTPCNWTGVQCTHSSLVTSVKLYHLNLSGTLSPRICDLPRLIELNLSKNFISGPIPDGFANCHSLEILDLCTNRLHGEILTPIRNITKLRKLYLCENYMYGEVPEDLGNLASLEELVIYSNNLTGIIPKSISKLKKLRVIRAGLNALSGPIPAEISECDSLETLGLAQNQLEGSIPRELQKLQNLTNLILWQNSLSGEIPPEIGNISNLQLLALHMNSFVGDVPKELGKLSQLKRLYIYTNQLNGTIPPELGNCTNAIEIDFSENRLVGFIPKELGKMSNLTLLHLFENHLEGHVPHELGQLKQLKNLDLSMNELTGTIPLEFQNLSLMEDLQLFDNKLEGTIPPHLGAIKNLTILDMSSNNFVGPIPVHLCQYQKLQFLSLGSNRLSGNVPYRLRTCKSLGQLMLGDNMLTGSLPVELYELHNLTALDLKQNRFSGLISPGIGQLKKLERLLLSDNHFEGYLPSEIGNLSQLVAFNISSNSFSGSIPRELGNCVKLQRLDLSRNNFTGELPEKIGKLVNLELLKASDNRLSGEIPGSLGNLIRLTELELGGNLFSGSIPFHLGGLTYVQIALNLSHNNLSGTIPISLGNLLMLESLYLNDNQLIGEIPESIGSLPSLIVCNVSNNKLVGTVPDKPAFRKMDFSNFAGNNGLCRLGTYHCHPPVSSTHSAKASWIRDGSTREKIVSIVSGVVGFVSLIFIVGICYAMRRRSPAFVSLEGQTRPHVTDNYYFPKEGFTYQDLLEATGNFAESAVIGRGACGTVYKAIMNDGEVIAVKKLNSRGDGANVDRSFLAEISTLGKIRHRNIVKLHGFCYHEDSNLLLYEYMENGSLGEQLHSNSSRCVLDWSDRYKIALGAAEGLCYLHFDCKPQIIHRDIKSNNILLDELFQAHVGDFGLAKLIDFSYSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELVTGRSPVQPLEQGGDLVSWVRRSIQASVPTSELFDKRLNLSVQRTMDEMSLILKIALFCTSTSPLTRPTMREVIAMLIDAREYVSNSPSTPTSESPLDEGSSSKG 1103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01925 1103 Gene3D Transferase(Phosphotransferase) domain 1 880 1092 - -
Aip08g01925 1103 SUPERFAMILY RNI-like 247 562 - -
Aip08g01925 1103 SMART LRR_typ_2 500 524 IPR003591 -
Aip08g01925 1103 SMART LRR_typ_2 548 572 IPR003591 -
Aip08g01925 1103 SMART LRR_typ_2 284 308 IPR003591 -
Aip08g01925 1103 SMART LRR_typ_2 92 115 IPR003591 -
Aip08g01925 1103 SMART LRR_typ_2 645 669 IPR003591 -
Aip08g01925 1103 SMART LRR_typ_2 596 620 IPR003591 -
Aip08g01925 1103 SMART LRR_typ_2 332 356 IPR003591 -
Aip08g01925 1103 SMART LRR_typ_2 164 187 IPR003591 -
Aip08g01925 1103 SMART LRR_typ_2 236 260 IPR003591 -
Aip08g01925 1103 Pfam Protein kinase domain 804 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01925 1103 PANTHER OS07G0152200 PROTEIN 12 1086 - -
Aip08g01925 1103 Pfam Leucine Rich Repeat 648 669 IPR001611 GO:0005515
Aip08g01925 1103 Pfam Leucine Rich Repeat 550 571 IPR001611 GO:0005515
Aip08g01925 1103 SUPERFAMILY L domain-like 28 298 - -
Aip08g01925 1103 ProSiteProfiles Protein kinase domain profile. 802 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01925 1103 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Aip08g01925 1103 SUPERFAMILY L domain-like 495 690 - -
Aip08g01925 1103 SMART serkin_6 802 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01925 1103 ProSitePatterns Serine/Threonine protein kinases active-site signature. 925 937 IPR008271 GO:0004672|GO:0006468
Aip08g01925 1103 Gene3D Ribonuclease Inhibitor 451 718 IPR032675 -
Aip08g01925 1103 Gene3D Ribonuclease Inhibitor 284 450 IPR032675 -
Aip08g01925 1103 MobiDBLite consensus disorder prediction 1083 1103 - -
Aip08g01925 1103 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 12 1086 - -
Aip08g01925 1103 SUPERFAMILY Protein kinase-like (PK-like) 779 1075 IPR011009 -
Aip08g01925 1103 Gene3D Phosphorylase Kinase; domain 1 771 879 - -
Aip08g01925 1103 Gene3D Ribonuclease Inhibitor 180 281 IPR032675 -
Aip08g01925 1103 Gene3D Ribonuclease Inhibitor 25 179 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01925 Aip-Chr8 52641752 52647525 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01925 51 1079 Receptor kinase-like Gene Family AT1G73080 37.407 0.0 641
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip08g01925 Pkinase 5.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01925 - - gmx:100818311 1775.76