Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01920 ATGAATACTAGTTGCAACAACAATCTCCAAACAGAGCCAGCAACTACCTCCAGCAATGGAAGCGGCAATGGTAAAGCTTACCCAAACAGTAGCGGTTCTAACAGTTCAAAACGGAGGCAGGGCAATATCAACAGAGACTCCAGCAGCAGCAGTGGAGTTCTTGTCAAATTTAGAAACCAGAAGCAGAACCGACTGGTCTCTCTCTCTCTCTCCAGCGGCGACGGCTCCGACCACACCAGCGACGGTGGCTCCGACCACACCAGCGACGATGGCGGCAGTGATGCACGAAACTCCTCCAGCGGCGACAACGCGTGGCTAGACGACAACAACCCTAGTAGCAGCATCTTCCCAAGTGGCTTCAACAGCAGCAACCAAGCGCGGCAACGGCGCGGTGGCGACACAGCAGAGGCTCCCTCCTCCACTGACTCTCGCGCGGCTCTTCCTTCTTCCCTGAACAGCGTCGACGAACAGAGGTGGCGGCTCCTTACGCGCGTCTCTCCTCCCCGCGTGGTCTcctcggcgctggtgcaaacggcaacgcgacgcgacgacggtcctgggtggcgcggcagAACGAACATATTCAATCTCAAGCTGCACACTGTTGGGATCATTGCTGCCAGTTTCGGATTGGCGAATCTTTTCTCCAGGCCCGGTGGAGGGTTCATATCTGATGCAGTTTCAAAGAGGTTTGGAATGAGGGATAGTCAGAGTTCAACAGCAACCACCTTAAGATGCTGTTTTGCTCTTAATAGTTTGAAATTGGATTGCAAGACAAGGAGAATGTTTGAGGAAAAGGGGTGTTACAGAGCTAATGAAGGGAACCCAAGAGTCAGATCCAAGTTTATTGCACCATGTTATTATATGAACAAGTTGACTGAACAAAAATTGACGAGAAGGAAGTTTTTCTCATCAAATGGTTTTCCTTGCCCAAGGTCCATGCCTAAGCAAAGTGGGCACTACTGTTTCTTTTATTTAGTGATGGCACTACTGAATCCGACAATATCAGAGGGTGAAAACCAACGAGAGGCTGCTGATTCTATTGGTTTGAAAGAGATACCAAGATATGAAGTTAAAATTATTGAGGAGGATGACTGGATGAAAGGAGCTCAGTTTGGTGCTGCCTTTGCCATTGGAGTCGATATAGATTCACAAGCAATTGCATCAGCATCTGAAAATGCTACTCTGAATAATATCATACCAGACAAGCTGCAACTGCACTTGATTGCAAGCCAAACTTCTTCATCTTGCAGGGATGACTGGCCATCTAGACCGGGAGCAATTATTGGTCTCTCTGGAATCTTAAGTGAACATGTCCAGAACTTATTACAGAAATATTTACTATTCTTAGAAGGCATAGAAGTGTCAAAAATGGATGACTGGGCCTGTGTTGCTAATCTCTTGATCGTTGTATATTTCAAGTCTCATGATAGCTTTGATGGTTTAGATGGTATATGA 1458 0.4479 MNTSCNNNLQTEPATTSSNGSGNGKAYPNSSGSNSSKRRQGNINRDSSSSSGVLVKFRNQKQNRLVSLSLSSGDGSDHTSDGGSDHTSDDGGSDARNSSSGDNAWLDDNNPSSSIFPSGFNSSNQARQRRGGDTAEAPSSTDSRAALPSSLNSVDEQRWRLLTRVSPPRVVSSALVQTATRRDDGPGWRGRTNIFNLKLHTVGIIAASFGLANLFSRPGGGFISDAVSKRFGMRDSQSSTATTLRCCFALNSLKLDCKTRRMFEEKGCYRANEGNPRVRSKFIAPCYYMNKLTEQKLTRRKFFSSNGFPCPRSMPKQSGHYCFFYLVMALLNPTISEGENQREAADSIGLKEIPRYEVKIIEEDDWMKGAQFGAAFAIGVDIDSQAIASASENATLNNIIPDKLQLHLIASQTSSSCRDDWPSRPGAIIGLSGILSEHVQNLLQKYLLFLEGIEVSKMDDWACVANLLIVVYFKSHDSFDGLDGI 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01920 485 MobiDBLite consensus disorder prediction 1 78 - -
Aip08g01920 485 PANTHER ELECTRON TRANSFER FLAVOPROTEIN BETA SUBUNIT LYSINE METHYLTRANSFERASE 424 464 - -
Aip08g01920 485 PANTHER ELECTRON TRANSFER FLAVOPROTEIN BETA SUBUNIT LYSINE METHYLTRANSFERASE 370 413 - -
Aip08g01920 485 MobiDBLite consensus disorder prediction 1 151 - -
Aip08g01920 485 MobiDBLite consensus disorder prediction 93 151 - -
Aip08g01920 485 Pfam Ribosomal protein L11 methyltransferase (PrmA) 370 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01920 Aip-Chr8 51774360 51782465 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01920 195 263 Inorganic Solute Cotransporters AT1G12940 47.368 2.03e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01920 - - ahf:112758361 214.157