LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip08g01919	ATGTCAGATATATTTACGGACACTGAGATGGATGAGCAATACCAGGAGGACGATGTCATTAACCAACAAGAAGAGCTAGTTTGTGACCAAGATATGACGGATGAACAGAATGAATTCGAACAAGATTTCAGAGATGAATTTACTGAGGGAGCGTATTTTTTTGAATTTAATCCGTCAAAAGATACCCTTGAAGCTGCTTATGTGGTTGACTCCATGCAAGACATTACAATTTTGAATTTCAGTGAAAATTGTGCGGAAGAAATTGGTAAATATCACTTTTCTACTTTTCATCTTGTATTTAAATTTTATCTAAAGTACTCAAAGTCAAAGGGCTTTAGTGCAAGGAAAAGTAAGACTTTCAAGAATAGTATTGGCAAGGTTTACAAACAAAAGTTTGTATTTTCTAGGCAAGGATTCAGGGAGGAGAAGTATTACACAATGGAAAAAATTAAGAAGGAGCCTAGATTGGAAACAAGAACTGGGTGTGAAACCCGAATGGATGTTAAATTTGTACCAGAAACTGGAAGGTGGCATATCTTTTATTTCTCTTACAAACACAACTATGATCTATTGGATACACAATTCAGTGCTACGCTGCTTGCCCACAGAAAAATGTCAGAGGAAGATATTATGCAAATGGTGAACATGCTAAAGTCCGGGATTAGCACTTCACAGATATTTGGTCTTCTAGCTAGTCAAGCAGGCGGGTATGAATTTGTTGGCTATGGTCCCAAAGATATGTACAATGAGATTGCTCGGCAAAGGCCTCAACTTCTTGGTGATGCAGCACGAGTGTTGAAGAAGTTGGAGGATATGCGGTTGAAGGATCCACAATTATATTTCAAGGCATGTCATGATTCAAGAGGTTTGTTTCATAACTTGTTCTGGTCTAATGGGATTAGCCAACTAGACTACCAACTCTTCGGGGATGTTATTGCTTTTGATACTACGTACAAGAAGAACAAGTATAGTTTGTCCATTAGTCATATTCAGCGGGGTTAA	1002	0.3782	MSDIFTDTEMDEQYQEDDVINQQEELVCDQDMTDEQNEFEQDFRDEFTEGAYFFEFNPSKDTLEAAYVVDSMQDITILNFSENCAEEIGKYHFSTFHLVFKFYLKYSKSKGFSARKSKTFKNSIGKVYKQKFVFSRQGFREEKYYTMEKIKKEPRLETRTGCETRMDVKFVPETGRWHIFYFSYKHNYDLLDTQFSATLLAHRKMSEEDIMQMVNMLKSGISTSQIFGLLASQAGGYEFVGYGPKDMYNEIARQRPQLLGDAARVLKKLEDMRLKDPQLYFKACHDSRGLFHNLFWSNGISQLDYQLFGDVIAFDTTYKKNKYSLSISHIQRG	333

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip08g01919	333	Pfam	FAR1 DNA-binding domain	101	191	IPR004330	-
	Aip08g01919	333	PANTHER	OS02G0262500 PROTEIN	87	325	-	-
	Aip08g01919	333	PANTHER	PROTEIN FAR1-RELATED SEQUENCE 10-RELATED	87	325	IPR031052	GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip08g01919	Aip-Chr8	51685208	51686209	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Aip08g01919		FAR1	1.1e-15	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip08g01919	-		-	aip:107611076	679.863