Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01914 ATGAATGAAGTGATAGCTCAACTTCAACATGCCCTGGCACTGCAAGAGGAGGCAGATTCCAACACAAGTGAATTGAAAAAGAAGCGAAGAGACAGGATCAATGAGAAGATGCGTGCATTGCAAGATCTCATACCAAACTGCAATAAGGGTTTGATGTGGGAGAACTCTCAGAAGAGAGTCTGGATGATTGGGAAGGTTTAG 201 0.4378 MNEVIAQLQHALALQEEADSNTSELKKKRRDRINEKMRALQDLIPNCNKGLMWENSQKRVWMIGKV 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01914 66 Pfam Helix-loop-helix DNA-binding domain 24 45 IPR011598 GO:0046983
Aip08g01914 66 Gene3D - 13 60 IPR036638 GO:0046983
Aip08g01914 66 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 17 66 IPR011598 GO:0046983
Aip08g01914 66 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 19 49 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01914 26 49 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 83.333 3.89e-09 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aip08g01914 HLH 8.8e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01914 K12126 - osa:4337752 50.447