Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01904 ATGCAGTTCGGTAGGCTTTTAAGCTGGTTCGAGTGTACGTCCAACACCACCAACTTCACCACATTAGTGCCGATAATTGTCACTGGATTTTTCCGTCAAGTTTGGTCAGGGAATACAATGAAGGGGCTGCGATGGCTCACTTTTGGGAGGAACAGGGCCAGTGGTCCTGTCGGTGAGAATCCTAGGGAGGGTATGTGCTTTGGCACTCTTCTTGAAGCGCGCAATTATTATCATCGTTATGCTGCAAAGATGGGTTTTGTACCAAAAATAAGGAACACAAATTATGAGAAGCACAGCAAGGATAAGATACCTATAAATCAATCCATGCATTGCAATAAAGATGGCCATCGTATATCTCAGAAAAGGGCACCCAAGAGAGCAAAAACAATCACATCTGTAGGCTGCAAAGCACGTTGTTATGTAAGGTTGGACAAGTCCACAGGTCTATGGAAAGTTTCAAAGTTAGAATTGTCTCATACACACCCGCTTAATCCGAAGCCTTCAGCCATCCTGGAGAATAGAGAGCTCTGCCAGCACACGAAAGATCTGATACAGCGTAATGATGAAGTCGATAGACAACCCAACAAGACCTTTCAGGCATCGACCATGGATATGGATAGAAAAATTTCTAGTCTCAATGCCATTCATCAGAGTCTTCTTACCAGCGGGACTACTGAATCAGCCGGAGAACATGGATCTTCATCAGCTACTCCTTCAGATGTCATAATTAAAGATGAGACCCCATTCCCGGTTAATAATCAAACTCCTTCCGATGTCATAATTAAAGACAAGTCCCCAATCCCGGTTAATATTCAAAATATTCCTGAAGAGCCATCGCCATCACCACTTCATTCTCTTCCAGAAAAGAATAGAAAGAAAGGCAAAGATACTGAGGCAGGTTGTGCTAGTGAAGTGGTGTCCGACCATGATTTTGGTTTCGTGTTAAAGAATACTTTTGATGCAGGTGGTTTTATCGACCAGTACCTTCTGGATTCATCAACTGTGGAGGTGTTGGAAAATATTCCTGCTAATGAGAACATTAGTAGGATGCAGCGAATGCTCCTAAAATCGGCAATCTTATGTCGCGACATGGAGAGGAGCTTTTCCGATTTGGAGAAGTTGAAGGAGAAGCTTGCAGCTAAAGAAAAAGAGATAGCTTTCCTCACTGCCCAAAATATTGAGCTATCCAGTAAAACTATTGAATTGTCTTCTCAAGTGTCAAGGTTAGTAGAGGAGAAAAAGACACTATCTTGTGACCTGAAAGCTTCTGAAAAGAAGGCCTCAGAGTTCAAGAGGAGCTTGGAGATTTCTAGGGACGAAATGGGTATTTTGAAGGATAACTATAAAAAACTTGGTATAGTAGTATTGGAGGGAGTGACTGATGTTGAGAAGAATATCAAGCAGCAAATTCAGTTGTTGGCTCCTAACTTGGATATTTCTAAAGTTGGGGCTTATCGTCATATTGTAAATGGTCAAATTGTTGACCTTCTTAACTAG 1497 0.4195 MQFGRLLSWFECTSNTTNFTTLVPIIVTGFFRQVWSGNTMKGLRWLTFGRNRASGPVGENPREGMCFGTLLEARNYYHRYAAKMGFVPKIRNTNYEKHSKDKIPINQSMHCNKDGHRISQKRAPKRAKTITSVGCKARCYVRLDKSTGLWKVSKLELSHTHPLNPKPSAILENRELCQHTKDLIQRNDEVDRQPNKTFQASTMDMDRKISSLNAIHQSLLTSGTTESAGEHGSSSATPSDVIIKDETPFPVNNQTPSDVIIKDKSPIPVNIQNIPEEPSPSPLHSLPEKNRKKGKDTEAGCASEVVSDHDFGFVLKNTFDAGGFIDQYLLDSSTVEVLENIPANENISRMQRMLLKSAILCRDMERSFSDLEKLKEKLAAKEKEIAFLTAQNIELSSKTIELSSQVSRLVEEKKTLSCDLKASEKKASEFKRSLEISRDEMGILKDNYKKLGIVVLEGVTDVEKNIKQQIQLLAPNLDISKVGAYRHIVNGQIVDLLN 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01904 498 MobiDBLite consensus disorder prediction 286 300 - -
Aip08g01904 498 Pfam FAR1 DNA-binding domain 75 165 IPR004330 -
Aip08g01904 498 MobiDBLite consensus disorder prediction 222 300 - -
Aip08g01904 498 MobiDBLite consensus disorder prediction 222 241 - -
Aip08g01904 498 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 58 284 - -
Aip08g01904 498 Coils Coil 361 398 - -
Aip08g01904 498 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 58 284 - -
Aip08g01904 498 Coils Coil 406 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01904 Aip-Chr8 50849798 50853126 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g01904 FAR1 1.1e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01904 - - adu:107459405 811.986