Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01877 ATGAACTTGGTCTTACTTCTCATCTACCTCGACCTAAGGATCTTGTTAAATATGCAGAAAGTTGCATGTACAGCCCAGGCTACAGAAACTACTGTTGAGATTTTTGAACCATATTATATCATACTCTGTTGCTCATTCCCAACTCAGACAAAGCTCATCGTCGGCGTTTGCACTCTCTCCTCTGTCGGTGCTCCCTCCGTCGTCTCCCCTAACCCGTCTCTGCTGGTGCTCGCATTCCCTGCGCTCACTACTCACGGTGTCGTCAATGCATATTTTGACTGTTCCGTCGCCGCCGCTAGAAGAGCACTCAACTGCAACAAAGGCAACGATTGGCCTTCTGCTTCCGGCGCTCACCAAGCCCGCTATCTCTGCGCTATCGATGCCAAGGTCGTCGAGAGAAAGGATCACCTCGCTAAGCTTGAATCCCTTGATTGCGGAAAACCACTCGATGAAGCTGCCTGGGACATGGATGATGTTGCTGGTTGCTTCGAGTTTTACGCTGACCTTGCCGAGAAACTCGAGGCTAAGCAGAAGGCACCCGTTTCTCTTCCCATGGAAACTTTCAAGAGAGAAATACATGATAGTTTGATCTGTGTGATTATTGTAAAGATCATTCAATGGGAAACTAATGAGGATTTGATCATATCAATATTGGGCCATCGAAATGCTGCTCAGAGGAAGCTGATTCGAGAAACTTATTTTGAGGCTTATGGAGAAGATCTCCTCAAGGCCTTGGACAAGGAGCTCAGCAATGACTTCGAGATCAGTACCATAGAATTATGGAGACATTTGTTTTTAATCTTTTGGAAGGCTTATCATGCTCGTTATAAGAAGTCTCTCGAGGAAGATGTTGCTCATCACACAACTGGGAGTTCCGTAAGTGCTCTGATTTCTTTTGGTCATCTTAGATATCTTCATTTGTTAATTGTTATGTTAATAGATCACGCTTTAAGTTTTATGGTTATTCATATTGGGGGTGAAACAAATCTTAAGTTTATATACTGCGCAGCTGCTTGCTTCCATGGTGGACGTGATGATCCGATACCCAGTCCATTTCACCCGTTGACAGATGGCAGCACCCAGCCCATAATTCATGTACTCACCAGGTATGATCTCTTGACCCTGCTAGCTTGGGGTGTTCTTTACAGGTTCTTCTTCTACTTGGGAGAGAGTCAACCTAATGGAAACAGTCATAAATCAACTAATCCATTTGATTTTCTTGATGATGCTGATGTATCAGATGTAGAGCACGGTAATATGGAAGCTGTGAAACACTTTGGTCCTGCTCCTGGAGTTCCTCACAGCCATACCAAGCTTTATGTACGATCCAAGGAAAGGAAGTTTGAGagggctagaggaaggatgaacaacaaagaacttagagtttaa 1389 0.4327 MNLVLLLIYLDLRILLNMQKVACTAQATETTVEIFEPYYIILCCSFPTQTKLIVGVCTLSSVGAPSVVSPNPSLLVLAFPALTTHGVVNAYFDCSVAAARRALNCNKGNDWPSASGAHQARYLCAIDAKVVERKDHLAKLESLDCGKPLDEAAWDMDDVAGCFEFYADLAEKLEAKQKAPVSLPMETFKREIHDSLICVIIVKIIQWETNEDLIISILGHRNAAQRKLIRETYFEAYGEDLLKALDKELSNDFEISTIELWRHLFLIFWKAYHARYKKSLEEDVAHHTTGSSVSALISFGHLRYLHLLIVMLIDHALSFMVIHIGGETNLKFIYCAAACFHGGRDDPIPSPFHPLTDGSTQPIIHVLTRYDLLTLLAWGVLYRFFFYLGESQPNGNSHKSTNPFDFLDDADVSDVEHGNMEAVKHFGPAPGVPHSHTKLYVRSKERKFERARGRMNNKELRV 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01877 462 SUPERFAMILY Annexin 206 297 IPR037104 GO:0005509|GO:0005544
Aip08g01877 462 Gene3D - 412 461 - -
Aip08g01877 462 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 76 208 - -
Aip08g01877 462 SUPERFAMILY ALDH-like 91 182 IPR016161 GO:0016491
Aip08g01877 462 Coils Coil 441 461 - -
Aip08g01877 462 Gene3D Annexin 206 260 IPR037104 GO:0005509|GO:0005544
Aip08g01877 462 SMART annex3 208 260 IPR018502 GO:0005509|GO:0005544
Aip08g01877 462 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 92 201 IPR016162 GO:0016491
Aip08g01877 462 ProSiteProfiles Annexin repeat profile. 186 270 IPR018502 GO:0005509|GO:0005544
Aip08g01877 462 Pfam Aldehyde dehydrogenase family 94 182 IPR015590 GO:0016491
Aip08g01877 462 Pfam Annexin 206 254 IPR018502 GO:0005509|GO:0005544
Aip08g01877 462 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1, CHLOROPLASTIC 76 208 - -
Aip08g01877 462 Pfam Ribosomal protein 60S L18 and 50S L18e 420 461 IPR021131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01877 Aip-Chr8 46861609 46870589 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01877 93 200 Aldehyde Dehydrogenase Gene Family AT1G74920 70.370 8.15e-42 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01877 K00130 - aip:110265331 257.299