Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01870 ATGGAGAATGATGACAAAGAGTCGTATAAGGATGATGATCAATCTGAGGATTTAAGTGTTGAGTATGAGTGCAGCTCCGATGAAAGTGATGATATGGTGGATGTAACTGTAGATGAAGCAGAGGTAGATATAATTAATGTTGATGGTTTTGAAAAGTTGATAACTGATTTGACCATCGAAGACATATGGGGACTAGTGTTTAATAAAGAATCTCAAGTTTGTGAATTTTATGCCAAATATGCCAAGTGCTATAGATTTGTGTCCCAAAAAGACTTGAAGACGGTGGATGCTAATGGCAACATTAATACAAGACAGTTGGTTTGCAATAAAGCAGGAGAAAGACATTGGAAGCACCTTAAAAGGGACAATCAACAAAGGGAGCGTAGGGCAATTACTCGTGTCAACTGCAGAGTAAAGATTTGGTTCATTCGTCACTATAGAACGGGTAAGTGGAAAGTCAGTGTCTTTGAGAGTGAATACAATCATCCACTGTGTCCACCTAAGTACAGACATCTTATTGCCGTGAATCGTGGGCTTGATAAGGCCGATAAAGCACAAGCAGACAGCTTGCGAGCATGTGGTGTTAAAACTTGCCACATAATGGGTTACATGGTTTCCCAAAAAGGTGGATATGATAAAGTGGGTTTTACCAGCAAAGACTTACATAACCACATTAGTAAGACTAGGCGTGGCAAAGTGAAAGACGGTGATGCATTTACTGCGTTGGCCTATCTATTTTCTAAGGCAGACATTGACCCGTTATTTCTAGGAAAGTTCACCTTAAAGGATGGTAGATTGGATAATTTGGTGTGGGCTGATGGAGAAAGCGTTGTTGATTACAAATATTTTGGCGATGTATTGGCTTTTGACACCACTTACAAGAAAAATGTCTACAACAAGTCCTTAGTCATATTTTCAGGGACCAACCACCATGGCCAGACAACTATCTTTGGATGCACTCTGCTCTCAGATGAAAGGTCCGAAACTTTCAAGTGGGCACTGAAGGAATTTTCGGAAATCATGTCAGGAAAACTACCCGGAGGCGTTGTGACAAACGGAGACCGTGCTATGAGAGAGGCCATCTTAGAAGTATTTCCTGGTATACCACACCACCTTTGTGCATGGCATCTCCATCGTAATGCGAGATGGAACGAGATCATATCCAAATACGGACTTGCCGAGAATGAATGGGTCCAGGGCATTTATAATGACAGAATGAAGTGGGCTACCGCATATTTGAGGGAGTACTTTTTTGGCCGCATAAGAACTACATCACAGTGTGAGGGAATTCATTCATTATTGAAGAACTATGTTGATAGTAAAACTAGTCTCCTTGAATTCATGCATAAATTTAGTGAAGTACTAAGGCATTACCGAAACAACCATCCTACTGCTGACTTTGAAACCTTTTATAAGTTTCCTATTTTGACTACGTGCTTGGAAAGTTTTGAAAAACAAGCTGCTGAACTTTATACTAGAAATATTTTCAAACTTGTGAAAGATGAGATAAAAGCAGCAGGTGCCTTAAATGTGACTGAATGCCCAAACAGTGGAGACATTGTTGAGCTATTTCAGACTCATGGATTATCATGCTCCCACATCTTTGGGGTCTTGAAGCATCGCAATGCAAAATGCGTCCCTACATCTCTTATCCTGAAAAGATGGACAAGAGATGCAAAGAGTGATTTTATATGCTCAATTGACGAGCAAGACACCGCTGATGATATAGTGCCCACACTTAGATGCGGTGCAATGGCATTTATTTGTTGGAAGCTTTGTGATATTTCTTCCAAAAATTCAGCCGACTATAGGGAAATCTCAGGTGAGTTACTTAAGCTAATTTCGAAGGTGCAAAATAAAGGTAATGCACAAGCGAGGCTTTCCCCCACGTCAGCACTAATAGGTGATCCAGCTGTTGTGAAGTCAAAAGGGGCTCCAAGAAAGGTTCCAAAAGGCCAAAAGAGGCGAAGATGTTCGCATTGTAAGTCAAGCAGGCATTTCGTTAGGACATGTCCATTACTCGCCAAGGAGGACTCCCCCGCCGAATACTCAAATGCTGAAGATGAACCAATGGTATTAATATAA 2085 0.4096 MENDDKESYKDDDQSEDLSVEYECSSDESDDMVDVTVDEAEVDIINVDGFEKLITDLTIEDIWGLVFNKESQVCEFYAKYAKCYRFVSQKDLKTVDANGNINTRQLVCNKAGERHWKHLKRDNQQRERRAITRVNCRVKIWFIRHYRTGKWKVSVFESEYNHPLCPPKYRHLIAVNRGLDKADKAQADSLRACGVKTCHIMGYMVSQKGGYDKVGFTSKDLHNHISKTRRGKVKDGDAFTALAYLFSKADIDPLFLGKFTLKDGRLDNLVWADGESVVDYKYFGDVLAFDTTYKKNVYNKSLVIFSGTNHHGQTTIFGCTLLSDERSETFKWALKEFSEIMSGKLPGGVVTNGDRAMREAILEVFPGIPHHLCAWHLHRNARWNEIISKYGLAENEWVQGIYNDRMKWATAYLREYFFGRIRTTSQCEGIHSLLKNYVDSKTSLLEFMHKFSEVLRHYRNNHPTADFETFYKFPILTTCLESFEKQAAELYTRNIFKLVKDEIKAAGALNVTECPNSGDIVELFQTHGLSCSHIFGVLKHRNAKCVPTSLILKRWTRDAKSDFICSIDEQDTADDIVPTLRCGAMAFICWKLCDISSKNSADYREISGELLKLISKVQNKGNAQARLSPTSALIGDPAVVKSKGAPRKVPKGQKRRRCSHCKSSRHFVRTCPLLAKEDSPAEYSNAEDEPMVLI 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01870 694 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 65 509 IPR031052 GO:0006355
Aip08g01870 694 MobiDBLite consensus disorder prediction 1 23 - -
Aip08g01870 694 Pfam FAR1 DNA-binding domain 75 165 IPR004330 -
Aip08g01870 694 Pfam MULE transposase domain 286 380 IPR018289 -
Aip08g01870 694 PANTHER OS02G0262500 PROTEIN 65 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01870 Aip-Chr8 46702405 46704640 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g01870 MULE 2.1e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01870 - - ahf:112778948 1120.92