Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01869 ATGCCAAGGTTTTTCACTGTTGCCATCCCAAACAATGCTTCTTCTTCTTCTGCAACAACCGCCACTAACAACAACAACAACAATAATCTCCTTCATGATCCATCGCTTTGCGTTCCTTACATTCCAATCCCTAAAGCACTAACCAATTTGGCAACAGTTGTAGATAACACTACTAATCTTGCTGCATCTTCATCAATGCCCAAACAACAGGACCTCAACGGTGGCTGTACCGGTGGCGAAGGTGGTCATCATCACTTTGGCATATCCAGTTTGCTCGCGAAGAAACCGGCAGCAGCGAAGAAAGATAGGCACAGCAAGATTTACACCGCTCAGGGGCTGAGGGACCGAAGGGTGAGGCTATCGATCGAGATCGCGCGCAAGTTCTTCGATCTCCAAGACATACTAGGGTTTGATAAGGCCAGCAACACGCTCGACGGCTCTTCACCAAGTCCAAGAAAGCCATTAAGGAGCTTGCCAGGACTCAGGAGCAAGAACCACAGCGCCAGTGACGAAGCCGAAGCCGAAGCCGAAGCCGGTGCCAATAACAAGAGTTTTGCCTCGTCCTCTTACTGCGACGAAGATGACTTTGAAGTGCTTTCTAGAAACAACCATCACCGCCACCAACAACAAGGGTTAGTTTGGTCTTTATAA 651 0.4869 MPRFFTVAIPNNASSSSATTATNNNNNNNLLHDPSLCVPYIPIPKALTNLATVVDNTTNLAASSSMPKQQDLNGGCTGGEGGHHHFGISSLLAKKPAAAKKDRHSKIYTAQGLRDRRVRLSIEIARKFFDLQDILGFDKASNTLDGSSPSPRKPLRSLPGLRSKNHSASDEAEAEAEAGANNKSFASSSYCDEDDFEVLSRNNHHRHQQQGLVWSL 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01869 216 ProSiteProfiles TCP domain profile. 100 158 IPR017887 -
Aip08g01869 216 MobiDBLite consensus disorder prediction 140 188 - -
Aip08g01869 216 Pfam TCP family transcription factor 99 164 IPR017887 -
Aip08g01869 216 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 10 210 - -
Aip08g01869 216 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 10 210 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01869 Aip-Chr8 46700197 46701527 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01869 98 171 TCP Transcription Factor Family AT1G67260 62.162 1.54e-22 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aip08g01869 TCP 1.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01869 - - lang:109354107 133.265