Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01864 TTTATGCTTGGCTAGATAAAGATGTTGGCTATGGTCAAGGTGTATTTCCTAGGAGGGCCAAGAAGGTGGCAGTTGGAGGTGGCGAGGTGTCGGTGTCATCGGTGGTTGAAGCTGTGAGTTGTGGTGTTAATGGAAGGCCATTTGAGGTTGTGTACTATCCAAGGGGAAGCTCACCTGAGTTTTGTGTTAAGGCCTCAGTTGTGAGAGATGCAATGAAACTTCTTGATCCCATTCATTGGCCTAATTCTCCATGGCATCTTCTGCAGATCGGATATAGTAAGGTAGACATCCTCTGCTCAGAAAGTGGGAAGCAGCGAATAATTTACATGTTCCTAATGAGAGATAGACTGCCTCAATCGGATATACATTCGGCGGCGGCATGTTTGGGATGA 392 0.4643 YAWLDKDVGYGQGVFPRRAKKVAVGGGEVSVSSVVEAVSCGVNGRPFEVVYYPRGSSPEFCVKASVVRDAMKLLDPIHWPNSPWHLLQIGYSKVDILCSESGKQRIIYMFLMRDRLPQSDIHSAAACLG 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01864 129 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 72 97 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aip08g01864 129 PANTHER AUXIN RESPONSE FACTOR 16 72 97 - -
Aip08g01864 129 PANTHER AUXIN RESPONSE FACTOR 16 24 73 - -
Aip08g01864 129 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 24 73 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01864 Aip-Chr8 46099014 46100549 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01864 27 97 B3 DNA Binding Superfamily AT4G30080 39.806 5.27e-19 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01864 - - ahf:112803082 110.923