Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01852 ATGACAGATGATGGTGTCAATGACGCCCCTGCATTAAAGGGAGCAGAAATTGGAGTTATTGTTGCTGATGCTACAGATGCTACTAGAAGTGCTTCTAATATTGTCCTCACTGAACCTGGTCTTAGTGTCATTATTAGTGCAGTGCTCACTAGCAGGGCAATTTTTCAAAGGATGAAGAACTATATTGTTCATATGCTGCGAAAAGGATTCAAGGAGATTGGTCTGTTGAAAAATGGTGGAAGCAGTTCCTACCACAAGTTGAACCCAACTTCTATGTTGATTTAG 285 0.407 MTDDGVNDAPALKGAEIGVIVADATDATRSASNIVLTEPGLSVIISAVLTSRAIFQRMKNYIVHMLRKGFKEIGLLKNGGSSSYHKLNPTSMLI 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01852 94 PANTHER CALCIUM-TRANSPORTING ATPASE 1 65 - -
Aip08g01852 94 SUPERFAMILY HAD-like 1 58 IPR036412 -
Aip08g01852 94 Gene3D - 1 39 IPR023214 -
Aip08g01852 94 Gene3D - 40 70 - -
Aip08g01852 94 PANTHER PLASMA MEMBRANE ATPASE 1 65 - -
Aip08g01852 94 PRINTS H+-transporting ATPase (proton pump) signature 33 58 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip08g01852 94 PRINTS H+-transporting ATPase (proton pump) signature 2 18 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip08g01852 94 PRINTS P-type cation-transporting ATPase superfamily signature 2 21 - -
Aip08g01852 94 PRINTS P-type cation-transporting ATPase superfamily signature 25 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01852 Aip-Chr8 44237570 44237967 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01852 1 64 Primary Pumps ATPases AT3G42640 84.375 2.65e-30 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01852 K01535 - csin:114304476 108.227