Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01848 ATGAATAAGTCTGACCTTGCATATGTGAAGCTTGCATATTTGGATCCTTGGTATGGATTATACTCAAGTTTTGTGGCACCTCTTGTGTATGCTTTCATGGGAACCTCAAGAGATATTGCGATAGGACTTGTAGATATGGTGTCCCTCTTGCTTGGGAGTTTGATTTCTAGTGAGATCAGTGACATAAAAAGTCATGACTACGTGCGCCTTGCATTGACTGCTACCTTCTTTGCAGGAGTCACTAAATTGTATTGTGCTTTCATGAATGGTTATTGTGGGCTTGGTTTCTTCATAAATTTTCTATCTCATGCTGCTATTGTGGGCTTCATGGCTGGAGCTGCCATTACTACTACACTGTAA 360 0.4083 MNKSDLAYVKLAYLDPWYGLYSSFVAPLVYAFMGTSRDIAIGLVDMVSLLLGSLISSEISDIKSHDYVRLALTATFFAGVTKLYCAFMNGYCGLGFFINFLSHAAIVGFMAGAAITTTL 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01848 119 ProSitePatterns SLC26A transporters signature. 16 37 IPR018045 GO:0008271|GO:0008272
Aip08g01848 119 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 4 119 - -
Aip08g01848 119 Pfam Sulfate permease family 5 116 IPR011547 GO:0016021
Aip08g01848 119 PANTHER SULFATE TRANSPORTER 4 119 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01848 Aip-Chr8 43481401 43482029 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01848 4 119 Inorganic Solute Cotransporters AT1G22150 61.538 1.75e-38 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01848 K17470 - gmx:100784124 145.206