Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01846 ATGTCTCTCCGTCACCGAGTTACTTCTTCTCTCCATCGCACCAGCTTCTTCCACCGCTGTCGCCGCTGCTCGCGTCACAGGATCTCTCTCTGTCATCCCTCGCGTCACACGGGCTCCCTCCGCCGCCGCTCTCGTCACATGACTGTAGTTGAGGCATATGTTGGAAGGAACAAATTACATCAACCAGATGACTCATCAAATTTAAATCCGGAAGTTTTATCCTTGATAAACGAGGGCATTGCCCAGAATACTACTGGAAATGTTTTTGTGCCTAAGGAAGGGGGAGAGGCAGAGATTTCAGGATCTCCTACAGAGAAGGCAATTCTTTCATGGGCAGTAAAGCTCAACTCGTACATATTGCATTTGGGAGGGCTCTGGAGTACATATACATTGGAAAGGAGGGCTCTTGATCACGAGGGATTTGTCGCTAAGGGGCCTAATATGAATGTGGCTTTTGTGACTAAAGAGAAGGAGCTTATAATGCCCCACTTCGATAAAATTCTTAGTGGCTGCACAGCTAAGAGGGTTTTGACGCTTGCCGAGAAGTTGTTGAGCAAGGGTAAGCTTCGTGGGATAAGGATGAAACATGTGACTGTTGAGGAAGGAAAGAGTTCCGCTGAAATGATGCTTATTGGCAGTGGCGTTCTTGTTTGCCCTGTAGTGCAGTGGGACGAGCAAGTTATTGGAGATGGCAGATATTGGTCTTTCTATGGGCATCCAAGGAACTGA 729 0.4774 MSLRHRVTSSLHRTSFFHRCRRCSRHRISLCHPSRHTGSLRRRSRHMTVVEAYVGRNKLHQPDDSSNLNPEVLSLINEGIAQNTTGNVFVPKEGGEAEISGSPTEKAILSWAVKLNSYILHLGGLWSTYTLERRALDHEGFVAKGPNMNVAFVTKEKELIMPHFDKILSGCTAKRVLTLAEKLLSKGKLRGIRMKHVTVEEGKSSAEMMLIGSGVLVCPVVQWDEQVIGDGRYWSFYGHPRN 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01846 242 PANTHER AMINO-ACID AMINOTRANSFERASE 136 232 - -
Aip08g01846 242 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 46 131 IPR023299 GO:0000166
Aip08g01846 242 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 136 234 IPR036038 GO:0003824
Aip08g01846 242 PANTHER BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE-LIKE 136 232 - -
Aip08g01846 242 Pfam Amino-transferase class IV 136 222 IPR001544 GO:0003824
Aip08g01846 242 Gene3D - 134 237 IPR043132 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01846 Aip-Chr8 43447032 43450723 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01846 1 115 Primary Pumps ATPases AT3G21180 46.087 1.40e-25 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01846 K18482 - ahf:112756342 336.65