Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01834 ATGAACATCGATGACAATAAATTTTTAGAGGAGTCTATTGAATGTGATGAGTTATGTTTTGGGTATGATAGTAGTTCTGATAAAGAAGAGGAAGATATTATCAACAATGAGGGTAAAATTAGTGAATCCATAGAGGTGTCAAATTATAGCTATAAAATTCAAGAAGTTGAGAAGAAGTTAAACGAATTAAGTTATGATGACATGTGGGGTATTGAGTTTGACACCGTTGATCAATGTTGTGATTTCTATAGAAATTATGCTAGAGTGTATGGTTTTGTTGCGAGGCTTGACGAAAAAGTACAAGATTTCAATGGAAACATTAATATACGACATATGGTTTGTAACAGAGAGGGTACACGTAGAAAAAAGTACTTGGAGATGGAGAATAGAAAAAAGGATCATAAGCCAATCACACGTGTAATGTGTCAAGTAAAGATTAGATTTCACTATTACTTGGTTTTACAAAAGTGGTGGGTCACCAAATTTGAAGAGACTCACAACCATGACCTCATCCCACCTAAGTATATCCAGTTTGTTCCGGCATATCGAACAATGACCGACGCTAATAAAGCACAGGCTGATAGTTTGCAATTTTATGGTGTTAGAACATGTCATAGAATAGGGTTCATGGTGGCGCAAAAAGGAGGTCCGAACAGGACGGGATTCACAAAAAAAAATTATACAATCATTTTGACAGATTGA 702 0.3533 MNIDDNKFLEESIECDELCFGYDSSSDKEEEDIINNEGKISESIEVSNYSYKIQEVEKKLNELSYDDMWGIEFDTVDQCCDFYRNYARVYGFVARLDEKVQDFNGNINIRHMVCNREGTRRKKYLEMENRKKDHKPITRVMCQVKIRFHYYLVLQKWWVTKFEETHNHDLIPPKYIQFVPAYRTMTDANKAQADSLQFYGVRTCHRIGFMVAQKGGPNRTGFTKKNYTIILTD 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01834 233 Pfam FAR1 DNA-binding domain 81 171 IPR004330 -
Aip08g01834 233 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 30 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01834 Aip-Chr8 41603650 41604351 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g01834 FAR1 8.4e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01834 - - aip:107607226 427.557