Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01781 atgagacagaacacgattgagcgagagaaagggggttgtcgtcgccaccggaattcttgggcgccgccgTTCATACCTGTCATTTCTCGAGCTCGCCGTCGCTGCGTCTTCAAAGAAAGGGTCTCTCTGGAAGAACTTCCTTCCGCCATTTCCTCCTTGACTCACCTCACTGACATTGCCAACTTCTGTAGTCTTAAGGCAGGTCCATTTGTTCTACATAGTGTGCTAGCTCCAGTACTGGGCCTACCACTTAACCCAAAAACAGCTGCAGAAGCAGAGAGAATTTTGATAGGTTTTGGTAGAGCAAAAATCATTTACAAGGGTTATCATACTGAACAGGACAAGACAATTGAATGCCCTCTCTTTTTATATGGTACAAATGGGGATTCCAGCCATGTTTTGAGGATCTTTGACGAGGCGGCACAAGCTATGCAATCGGTTCGAAACTCAAAGCTTGAGCTGCAGAATTCTACTGCACTTGGAGAAACCACCCTTTCATCAATACATGGGCAAAGGGAACTCTTGAAGAGTGCTCATAGGAAAGCATTGGATATGCTGAACACAGTGGGGATGCCAAATTTAGTTTTGAGGCTAGCTGAGCGATGTGCTAAGCAAAGTGCTGAACACAGTGGGGATGATATGAAGAAAACATTTTCCATAGTAATATGA 669 0.3946 MRQNTIEREKGGCRRHRNSWAPPFIPVISRARRRCVFKERVSLEELPSAISSLTHLTDIANFCSLKAGPFVLHSVLAPVLGLPLNPKTAAEAERILIGFGRAKIIYKGYHTEQDKTIECPLFLYGTNGDSSHVLRIFDEAAQAMQSVRNSKLELQNSTALGETTLSSIHGQRELLKSAHRKALDMLNTVGMPNLVLRLAERCAKQSAEHSGDDMKKTFSIVI 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01781 222 Pfam Snare region anchored in the vesicle membrane C-terminus 140 201 - -
Aip08g01781 222 PANTHER VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED 123 205 - -
Aip08g01781 222 PANTHER GOLGI SNAP RECEPTOR COMPLEX MEMBER 2 123 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01781 Aip-Chr8 38504263 38506159 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01781 67 214 Glutathione S-transferase Gene Family AT5G41240 29.825 1.19e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01781 K08496 - adu:107479306 183.726