Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01773 atgttcacaaaaATTGCTGCTCTCTGCCCCAAGTCAACGCTCACTGCTGCCGCTTTTCCTGTCCACATCCCAGATCACCAGGATATTGTTTTTCCTCTCCTGATAAAACATTCAACATGCTTAATTTTTGTTGCCGGATCTCTCAACACTCTTCCAGCCAAAAGTACTCCACACGTTTTCCTATCCGATTGGTGGCTTGCCAAGCCTTGCCTTCCACTCCAGGGCTTAGCGGTTGGTGGCATTGCTTATGGCCTGAGAGAGAGAATGTTCTTATCGACAGTGATTGCAAAGAGGCACGAGGCGAATGTCTTGGAGACCGAAGACGGAGTCACTCTTCACTTAAATAGTTTCATTAACAGCTCCCGCTCATCTCAGAATGGCTTCCCGCGCAAGGTATGCAAAGACTTCTTGTTGGGATTTCCAGACGATTGGCAAAAGTACACTGCTCATAGTTTTGGAGCTAAATGTGTCAATGGGGATACTGGATTTCATGAGCCAAATGCTTGTTCACGCAAGAGGGCTATTGATGCTATCCCATTTTCCATTCATGATaggaaaagtctaggaggccaacaattttgttaa 585 0.4308 MFTKIAALCPKSTLTAAAFPVHIPDHQDIVFPLLIKHSTCLIFVAGSLNTLPAKSTPHVFLSDWWLAKPCLPLQGLAVGGIAYGLRERMFLSTVIAKRHEANVLETEDGVTLHLNSFINSSRSSQNGFPRKVCKDFLLGFPDDWQKYTAHSFGAKCVNGDTGFHEPNACSRKRAIDAIPFSIHDRKSLGGQQFC 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01773 194 Pfam SANTA (SANT Associated) 59 147 IPR015216 -
Aip08g01773 194 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 54 163 - -
Aip08g01773 194 PANTHER INTERACTING FAMILY PROTEIN, PUTATIVE-RELATED 54 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01773 Aip-Chr8 38412482 38417792 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aip08g01773 SANTA 3.4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01773 - - aip:107614256 271.166