Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01766 ATGCCTGGGAGCAAGTGTAACGGTAATTCTAATAATTTTCCAGGTCGAGTTGAACGACTCGTCAGAGGAAGAGAGCTAAGAAAAAGTAATATTTATAATGTTAATGGCGTTGCTGAATATTTTGAGCATGACCTGCGCTTGGGAGAAGAAAATAATTACTGTGTTGAACGTTCCCTAGAAGGGGTAGCAGCATCAAAGTCTCTTTGTGAAAGGGATGATGGGAAACCTTTCAGGCAACGGCTTTTGGTTGTTGCCAACAGGCTGCCAGTCTCAGCTGTTAGGAGAGGTGAGGATTCATGGTCTTTGGAGATAAGTGCCGGTGGCCTTGTTAGCGCTCTCTTAGGTGTGAAGGAATTTGAGGCAAGGTGGATAGGTTGGGCTGGAGTCAACGTGCCTGATGAGATTGGACAGAAGGCACTTACTAAAGCCTTGGCTGAAAAAAGATGTATCCCAGTGTTTCTTGATGAAGAGATTGTTCATCAATATTATAATGGTTATTGCAATAACATCTTGTGGCCCCTTTTTCATTACCTTGGACTTCCACAAGAAGACCGCCTTGCCACCACGCGTAGTTTCCAGTCTCAATTTACAGCATATCAGAAAGCAAATCAAATGTTTGCTGATGTTGTTAATGAGCACTATGAAGAGGGTGATGTTGTTTGGTGCCATGACTACCATCTTATGTTTCTTCCACAATGCTTAAAGAAATATAATAGCAACATGAAAGTTGGCTGGTTTCTACACACCCCGTTTCCATCTTCTGAAATTCACAGGACTCTGCCATCTCGATCGGAGCTCTTGCATGCAGTTCTGGCAGCTGACCTAGTTGGCTTTCACACCTATGATTATGCACGGCATTTCGTTAGTGCATGTACACGCATCCTTGGACTTGAGGGCACTCCTGAAGGGGTTGAGTATCAAGGGAAGCTGACTCGAGTTGCTGCATTCCCAATTGGTATAGACTCTCACCGATTTAAACGAGCACTTGAACTTCCTGAAGTCCAGAAGCACATCAAAGACTTAGAAGAAAGATTTAAACACAGAAAGGTAATGTTAGGTGTTGATCGCCTTGATATGATCAAAGGAATCCCTCAAAAAATTCTGGCATTTGAAAAATTTTTAGAAGAGAATCCTGACTGGCGTGAAAAAGTTGTTCTGCTTCAAATTGCTGTCCCAACAAGAACAGATGTTCCTGAGTATCAAAAGCTTACAAGCCAGGTTCATGAAATTGTTGGTCGCATCAATGGAAGATTCGGATCATTGACTGCTGTTCCTATACATCACCTGGATCGATCTCTTGACTTCTATGCATTATGTGCTTTGTATGCTGTTACAGATGTTGCACTTGTCACATCATTGAGGGATGGAATGAATCTTGTCAGTTATGAATTTGTCGCTTGCCAAGCTAAAAAAAAAGGAGTTCTCATTCTTAGCGAATTTGCTGGTGCTGCGCAGTCTCTTGGTGCTGGGGCAATTCTGGTCAACCCCTGGAACATCACAGAAGTTGCCGCTGCAATTGACAAGGCTTTAAATATGGAACCAGTGGAAAGACAGAACAGACACAAACATAACTTTGAGCATGTAACACAGCACACTGCTCAGGAATGGGCAGAAACTTTTGTCAGTGAATTGAATGATACTGTTGTTGAGGCACAGCTAAGGACAAAACAAGCTCCACCCCGACTCCCAACCAAGACTGCAATCGAACGTTATCTGCAGTCAAGTAACCGATTGCTCATTTTGGGGTTTAATGGAACTTTAACTGAACCTGTTGAGAAAAGAGGTGACCAGTTTAAAGAAATGGAGCTCACTGTTCATCCAGAACTGAAACAACCCTTGAAAGAACTTTGCAGTGACCCAAAGACCACAATTGTTGTGCTAAGTGGAAGTGGTCGAGCAGTTCTAGATCAAGTAATTCTCGTCACATTACGCCCTTTGCAAAATACTCGATCAAGTTTTAACTTATTGTTGTTACAGAACTTCAAAGAGTATGACATGTGGCTGGCAGCAGAGAATGGGATGTTTCTAAACCCTTCAAAGGGAGAATGGATGACAACAATGCCAGAACAGCTGAATATGGAATGGGTTGACAGTTTGAAGCATGTTTTTTTGTACTTCAGGGAGAGAACACCGCGGTCGTGTTTCGAAGAAAGGGAAGCTTCACTTGTATGGAATTACAAACATGCAGATGTTGAGTTTGGAAGAGTTCAAGCAAGGGACATGCTGCAGCATCTTTGGACAGGCCCAATTTCTAATGCGTCAGTTGAAGTTGTTCAAGGTAGCAGATCTGTTGAGGTGCGAGCTGCTGGAGTTACAAAGGGAGCAGCTATTGACCGCATCCTGGGTGAGATAGTCCACAGCAAATCCATGACAACACCGATTGATTATGTCCTCTGTATAGGACATTTTCTTGCAAAGCAGGATGAAGACATATATGCGTTTTTTGAGCCCGAGCTTCCTTCTTCCGGTGCGGCTCATTCACGAAGCAAGGTAACAGATGGAATCAAGTTTCCAGGTGAGAAGATGACATCTTTGAAGATCCCTGCTAACAAAAATGGAACAAAGTCATCTCAAAATAAGGCACAACGGCCTGCTCCAAATTCTGAGAAGAAACCAACCAACCATGTCTGCCGTGCACCACGCCGGCCGGCTCCTGAAAAGATCTCTTGGAATGTGCTTGACCTGAAGAAGGAGAATTACTTCTCTTGCGCCGTTGGACGAACGCAAACGAATGCTCGGTATACACTTGGCTCTTCAGATGACGTTGTTGCATTTCTGAAGGAACTAGCTGGCCCCAATGAGAAAAAGGAATGCAAAGGAAAGAAATTAAAGTCTTTCTTATGGGAGGACGAAAAGGAACATTGA 2865 0.4342 MPGSKCNGNSNNFPGRVERLVRGRELRKSNIYNVNGVAEYFEHDLRLGEENNYCVERSLEGVAASKSLCERDDGKPFRQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFTAYQKANQMFADVVNEHYEEGDVVWCHDYHLMFLPQCLKKYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLHAVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEYQGKLTRVAAFPIGIDSHRFKRALELPEVQKHIKDLEERFKHRKVMLGVDRLDMIKGIPQKILAFEKFLEENPDWREKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGSLTAVPIHHLDRSLDFYALCALYAVTDVALVTSLRDGMNLVSYEFVACQAKKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAAAIDKALNMEPVERQNRHKHNFEHVTQHTAQEWAETFVSELNDTVVEAQLRTKQAPPRLPTKTAIERYLQSSNRLLILGFNGTLTEPVEKRGDQFKEMELTVHPELKQPLKELCSDPKTTIVVLSGSGRAVLDQVILVTLRPLQNTRSSFNLLLLQNFKEYDMWLAAENGMFLNPSKGEWMTTMPEQLNMEWVDSLKHVFLYFRERTPRSCFEEREASLVWNYKHADVEFGRVQARDMLQHLWTGPISNASVEVVQGSRSVEVRAAGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLAKQDEDIYAFFEPELPSSGAAHSRSKVTDGIKFPGEKMTSLKIPANKNGTKSSQNKAQRPAPNSEKKPTNHVCRAPRRPAPEKISWNVLDLKKENYFSCAVGRTQTNARYTLGSSDDVVAFLKELAGPNEKKECKGKKLKSFLWEDEKEH 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01766 954 Pfam Glycosyltransferase family 20 80 545 IPR001830 GO:0003824|GO:0005992
Aip08g01766 954 Gene3D Glycogen Phosphorylase B; 72 326 - -
Aip08g01766 954 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 23 637 IPR001830 GO:0003824|GO:0005992
Aip08g01766 954 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 654 929 IPR001830 GO:0003824|GO:0005992
Aip08g01766 954 CDD GT20_TPS 80 545 IPR001830 GO:0003824|GO:0005992
Aip08g01766 954 Pfam Trehalose-phosphatase 660 834 IPR003337 GO:0003824|GO:0005992
Aip08g01766 954 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 654 929 - -
Aip08g01766 954 SUPERFAMILY HAD-like 577 930 IPR036412 -
Aip08g01766 954 Gene3D - 735 945 IPR023214 -
Aip08g01766 954 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 79 548 - -
Aip08g01766 954 MobiDBLite consensus disorder prediction 847 869 - -
Aip08g01766 954 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 23 637 - -
Aip08g01766 954 MobiDBLite consensus disorder prediction 842 881 - -
Aip08g01766 954 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 80 545 IPR012766 GO:0003825|GO:0005992
Aip08g01766 954 Gene3D Glycogen Phosphorylase B; 327 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01766 Aip-Chr8 37805656 37815624 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01766 1 930 Trehalose Biosynthesis Gene Families AT1G78580 75.495 0.0 1441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01766 K16055 - gmx:100789554 1549.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01766 08 37805656 37815624 Aip08g01766 08 37805656 37815624 ECH