Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01761 ATGAAGATTCAGTGCAACGTGTGTGAGGCTGCTGAGGCTAAAGTTCTTTGCTGTGCTGATGAGGCTGCGCTTTGTTGGGAGTGTGATGAGAAGGTTCATGCAGCTAACAAGCTCGCTAGCAAGCACCAGAGGGTTCCACTTTCCATGTCTTCTTCTCACATGCCCAAATGTGATATTTGTCAGGAAGCATTTGGCTATTTCTTCTGTCTAGAGGATCGAGCTTTACTGTGTCGAAAGTGTGATGTGGCAATACACACAGCGAATACTTATGTCTCCGGTCATCAGAGGTTTCTTCTCACTGGTGTAAGAGTAGGTCTAGAAGCAACCGAGCCCGGTGGTACTTCTTCAACTTCTTTGAAGTCGGATTCTGGGGAGAAAGCTTCCGACACCAAGTCCTCTTCTGTCTCCAGAAAGGTGTCGATGATGCCCCGGTCGTCGGATTACAATGAAATGTTACCCCTTGATGCTGGGGGAGTTGGTGAGATGCCTCCGGCTAAGGAGTCTTATGGTGGTGGTTCTACTGCCGGAAATATCTCACCATGGCCGATCGAAGAATTCCTTGGCCTAAATGATTTCGGTCAAGGTTATAATTACATGGAAGGATCATCAAAGGCTGATAGTGGTAAGCTTGGGGATTCTGATTCTCCAGTCTTAAGATCCGTGGAAGAGGAAATGGGAATGGAGGACGATGATGAGTNNNNNNNNNNNNNNNNNNNCTTCGGGGTTGTACTGGCCGAAAGACCCTCAGTTTTCATCCGACCATGCTATGTTTGTTCCGGACATATGCTGTTCTACCATGCAAGAGACTCGGTCTTCGAGGCGGCGGAGGCACCACCTTTGAGTTGGTTTCTTCTCAGGAGAGTAGAAGACAATACTTTGGAGATTGAATTCGTATTGCCAGAAGCTTATCAAACAATGCCGTTCTCTTTGAAGAGCCTGAAAATCGCCGCTTTGGGTTCTATTTGCTTTGCATGTAATCTGTTTGTTGCCGACGGTCTCTGCACCGCCGTTAAGTTTGGTGTAATTCACGGCGTGAAAGTTCTTAGGGTGGAGGATGGAGGCACTGGCCTCGAATATGTCGCCGACAATTGTGACAATAGCCATACAATCGTCGACGGTGGTGCTATGCTCGATGACGAGAATTTTTGTTGGAAAGTCAGAAGAGTGAAGGGAGTACTTGCTGAGGAAGTGAGCAACAGAGGAACTATCAAAACTGACGCCGATCATACAAACAGTGATGACGGCCGTTTTGGCTATTGCAAAGGGGTCGATAAGTCCCGAATATGGACGCACAAAATTCACGTGGACTAG 1311 0.4691 MKIQCNVCEAAEAKVLCCADEAALCWECDEKVHAANKLASKHQRVPLSMSSSHMPKCDICQEAFGYFFCLEDRALLCRKCDVAIHTANTYVSGHQRFLLTGVRVGLEATEPGGTSSTSLKSDSGEKASDTKSSSVSRKVSMMPRSSDYNEMLPLDAGGVGEMPPAKESYGGGSTAGNISPWPIEEFLGLNDFGQGYNYMEGSSKADSGKLGDSDSPVLRSVEEEMGMEDDDEXXXXXXXFGVVLAERPSVFIRPCYVCSGHMLFYHARDSVFEAAEAPPLSWFLLRRVEDNTLEIEFVLPEAYQTMPFSLKSLKIAALGSICFACNLFVADGLCTAVKFGVIHGVKVLRVEDGGTGLEYVADNCDNSHTIVDGGAMLDDENFCWKVRRVKGVLAEEVSNRGTIKTDADHTNSDDGRFGYCKGVDKSRIWTHKIHVD 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01761 436 Gene3D Classic Zinc Finger 1 92 - -
Aip08g01761 436 MobiDBLite consensus disorder prediction 110 143 - -
Aip08g01761 436 SMART bboxneu5 4 47 IPR000315 GO:0008270
Aip08g01761 436 SMART bboxneu5 52 99 IPR000315 GO:0008270
Aip08g01761 436 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Aip08g01761 436 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Aip08g01761 436 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 226 - -
Aip08g01761 436 Pfam B-box zinc finger 54 95 IPR000315 GO:0008270
Aip08g01761 436 CDD Bbox1_BBX-like 5 47 - -
Aip08g01761 436 PANTHER B-BOX ZINC FINGER PROTEIN 18 1 226 - -
Aip08g01761 436 CDD Bbox1_BBX-like 56 99 - -
Aip08g01761 436 MobiDBLite consensus disorder prediction 109 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01761 Aip-Chr8 37267750 37276767 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01761 1 218 C2C2-CO-like Transcription Factor Family AT1G78600 55.022 1.17e-75 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aip08g01761 zf-B_box 1.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01761 - - gmx:100790959 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01761 08 37267750 37276767 Aip08g01761 08 37267750 37276767 ECH