Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01758 ATGGCTTCGCCGTCTCCATCAATGGAAAGAAGGGTTGCCGGGGTTAAAGATACCACTGGGGGCGTTAGCGTCGCCGATGAAGCAGAAATGTCTGACAGAACAGACCACGGAGTTGGATCGTTTGAGGGCGAAGGCTCTGCAGGGATGGAGTCGGAGGATTTGGACGGCGCCGGAGGAATGTCTGACAATTATGCGAAGGACGAGTTTTACGCTGTTGATTCAGTGGAGTCGATAGGTTGGATTGATTTTTTGAACTTGAGCGAGGAAGATGTTCTCCAGTTTAATTTCGCAGATGTTGACATTGCATTTGAGTTCTACCAGCAATATGCAAAGCACCATGGCTTCGGCGCGAGACGTTCCAGAAGCGAAAAATGCGGCGAAGTAAGGATACGTCAGGAGTTCGTGTGCCACCGACAAGGGTTCCGATCCCCGAAGTTCTACTCGATGCCTAACTGGCAAAAGAGGCCGAGGGCCGAGACACGATGCGGATGA 492 0.5163 MASPSPSMERRVAGVKDTTGGVSVADEAEMSDRTDHGVGSFEGEGSAGMESEDLDGAGGMSDNYAKDEFYAVDSVESIGWIDFLNLSEEDVLQFNFADVDIAFEFYQQYAKHHGFGARRSRSEKCGEVRIRQEFVCHRQGFRSPKFYSMPNWQKRPRAETRCG 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01758 163 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 47 163 - -
Aip08g01758 163 Pfam FAR1 DNA-binding domain 104 163 IPR004330 -
Aip08g01758 163 MobiDBLite consensus disorder prediction 1 60 - -
Aip08g01758 163 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 47 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01758 Aip-Chr8 37139973 37140684 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g01758 FAR1 1.4e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01758 - - aip:107647116 274.248