Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01726 ATGAGTAGCTTACAATGGAAGAAACTGAAAGTCTTGGAAACGGGTTTTTATGGTACTGTTTATCTTGCAATTGTTGTTGATACACAAACACCGTATCAGAGCTTCATTGCTGTAAAGAGATCCATTTTCAGATTGGCATTCTCACTGAAGAAAGAAGAACAGATTTTTAAATCATTGTGCGAAGGTGAAAGCAGTGGTTGCGAAGAAATCATTCGATGCTTTGGAATTGAGACCACGGTAGAGCACAGACCTTATTTTTACAATCTTCTGTTGGAGTATACTCCTCACGATTCTTTGGATGACTTAATCCACAAGAAACTTCTGCTGGGGACCGACGTGAGCGTCAATGCACACGTGATTGTTAAAGGACTTTCGCATATTCATCGTAAAGGAATTGTCCACTGTGACCTCAAGCTGGAGAACATTATTTTGTTTCCTTCATTGGACAAAGAGAGTACAAAATATCAATTGAAGATCGCAGATTTTGGATTATCTAAGACCAAAGAGGAAGAAGCAGATGTTGAGGTTTGGAAGTCCAAGCCTAGAGGTATGCCATCATACTTGTCGCTAGAGGAATTTTCCAATCATATTGATGCTCCGATGGATATATGGGCACTTGGTTGCATAGTGATTGAAATGttgtaa 645 0.3922 MSSLQWKKLKVLETGFYGTVYLAIVVDTQTPYQSFIAVKRSIFRLAFSLKKEEQIFKSLCEGESSGCEEIIRCFGIETTVEHRPYFYNLLLEYTPHDSLDDLIHKKLLLGTDVSVNAHVIVKGLSHIHRKGIVHCDLKLENIILFPSLDKESTKYQLKIADFGLSKTKEEEADVEVWKSKPRGMPSYLSLEEFSNHIDAPMDIWALGCIVIEML 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01726 214 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 5 214 - -
Aip08g01726 214 Gene3D Transferase(Phosphotransferase) domain 1 3 214 - -
Aip08g01726 214 ProSiteProfiles Protein kinase domain profile. 6 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01726 214 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Aip08g01726 214 SMART serkin_6 6 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01726 214 SUPERFAMILY Protein kinase-like (PK-like) 6 214 IPR011009 -
Aip08g01726 214 Pfam Protein kinase domain 8 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01726 214 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 5 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01726 Aip-Chr8 35157850 35158494 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01726 4 213 MAP Kinase Kinase Kinase AT4G36950 38.140 1.17e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aip08g01726 Pkinase 7.7e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01726 - - aip:107610915 421.394