Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01725 ATGATTGTTAAAGGGCTTTCACATATTCATCGCAAAGGAATCGTCTACTGTGACCTCATGCCAGAGAACATTCTTCTGTTTCCTTCATTGGACAAAGAGAGTGCAAACTATCAACTGAAGATTGCGGATTTCGGATTATCTAAGACCAAAGAGGAGAAAGTAGATGTTGAGGTTTGGAAGTCCAAGCCTAGAGGGTCTCTTGGGCCAGGCCGTCTTCTTTTCCTTGATGGCTTTGTCGAAAGGGAGTTGGAGTCGGGCGGTGTTAGGATATAG 273 0.4469 MIVKGLSHIHRKGIVYCDLMPENILLFPSLDKESANYQLKIADFGLSKTKEEKVDVEVWKSKPRGSLGPGRLLFLDGFVERELESGGVRI 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01725 90 SUPERFAMILY Protein kinase-like (PK-like) 2 53 IPR011009 -
Aip08g01725 90 Pfam Protein kinase domain 2 55 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01725 90 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 65 - -
Aip08g01725 90 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 65 - -
Aip08g01725 90 Gene3D Transferase(Phosphotransferase) domain 1 1 75 - -
Aip08g01725 90 ProSiteProfiles Protein kinase domain profile. 1 90 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01725 Aip-Chr8 35148306 35149045 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01725 2 58 MAP Kinase Kinase Kinase AT4G36950 45.614 2.07e-09 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aip08g01725 Pkinase 9.6e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01725 - - aip:107607795 125.176