Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01721 ATGCATATTGGGATTCTTGCGGCAGCTGCTCATGCTACTGCAAATAATAGTCCCTTTACCGTCTTTTACAATCCTAGGGCTAGTCCTTCAGCGTTTGTTATTCCTTTAACCAAGTACTACAAGGCAGTATTTCTATTCTCCTTTTCAGAGTTTGTGAGATGGAAAAATTCACAATGGCGTAATTTACAGGTTGGTTGGGATGAGTCAACTGCTGAGAATTGGGATTTTTAA 231 0.3983 MHIGILAAAAHATANNSPFTVFYNPRASPSAFVIPLTKYYKAVFLFSFSEFVRWKNSQWRNLQVGWDESTAENWDF 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01721 76 Gene3D - 37 75 - -
Aip08g01721 76 PANTHER AUXIN RESPONSE FACTOR 19 52 72 - -
Aip08g01721 76 PANTHER AUXIN RESPONSE FACTOR 19 1 44 - -
Aip08g01721 76 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 44 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aip08g01721 76 Pfam Auxin response factor 9 43 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Aip08g01721 76 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 52 72 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01721 Aip-Chr8 35052600 35053067 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01721 1 71 B3 DNA Binding Superfamily AT1G19220 54.545 2.17e-22 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01721 - - adu:107494169 121.324