Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01719 atgGTTGCTGCACTTTTTCGTGACCATGAAGATCTTCTTGAGGAGTTTACTCATTTTCTTCTTGATAAGAGCTCTGCAATGCCTACTGTTATACTAATGGATGTTGACACGAAAGAAAGTACCATGGCTTCTCATGATGACTCTGGTGCTGAACCAATCCATGATGAAGATGAAAAGTTTGACCTGTGCCCTATATCATCTACTTGTGAAGATATCTTTGAAAAGAAAATAATTACCCGACAGTTATTTGAAAATTTATGTGCCTTCATGCAGAAACCTGAAGAAGGATCAATCAGTCAGAGTATAGCGATTGGCAAATTACAGGTTTCACTTACACACTCAATAATAGATATAAGTGAAGTCGATGAGGATTCTGATGATTTCCTTCAGCCACATGAAATGGAGGCATATATATGA 417 0.3717 MVAALFRDHEDLLEEFTHFLLDKSSAMPTVILMDVDTKESTMASHDDSGAEPIHDEDEKFDLCPISSTCEDIFEKKIITRQLFENLCAFMQKPEEGSISQSIAIGKLQVSLTHSIIDISEVDEDSDDFLQPHEMEAYI 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01719 138 ProSitePatterns EF-hand calcium-binding domain. 122 134 IPR018247 -
Aip08g01719 138 Pfam Paired amphipathic helix repeat 2 20 IPR003822 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01719 Aip-Chr8 35041551 35043291 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01719 46 138 EF-hand Containing Proteins AT5G18580 40.206 8.81e-08 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aip08g01719 PAH 6.7e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01719 K11583 - twl:120014336 58.151