Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01710 ATGAAACTCATAACTATCTTCTTTCTCTCCCTCCTTGCATCACCATTAGTTTCTGGAGCCACTCTAAAACAACAGGAAGTGGAAGTTCTCAAAGAGATTGGGAACACGCTTGGGAAGAAGGATTGGGACTTCAGCGTAGATCCATGTAGCGGAGAAAGGAATTGGACTTCCCCTGCTTCAAAATCTTATTCAGAACTAAATGCAGTAACTTGTGATTGTTCTTTCTCTAATCACACTCTCTGCCATGTAGTTAGCATAGTTCTGAAATCACAAAATCTTTCTGGTAGTCTTCCGCCACAGCTTGCAAGGTTGCCTTACCTACAAGAAATTGATCTCACCCTCAACTACCTTAACGGCACAATTCCAAAGCAATGGAGTTCCTTGAATCTTGTCAACATTTCTCTTTATGGAAATCGAGTAACAGGTTCAATCCCAAAGGAACTAGGAAATATAACCACTCTCAAAAGTTTGGTCCTGGAGTTCAATCAATTATCTGGAAATCTACCTATGGAGCTTGGGAGCCTTCCCCAAATTGAAACACTACTTCTTACTTCCAATAATTTCACTGGAGAGTTGCCTGCATCATTTGCTAACCTCACTACACTGAAGAACATTCGACTAGGTGACAATCAATTCTCTGGATCAATACCCAATTTTATTCAGAACTGGAGAAGTGTTGAGACAATGGTAATCCAGGGTAGTGGCTTCAGTGGACCAATTCCTTCAGGAATTTCACTTATGAAGAACCTTACTGACTTGAGAATTAGTGACTTGAATGGATCCGATTCACCTTTTCCCCAACTTGATAGAATCACAAATTTGCAAACACTAATGTTGAGGAGTTGCAATATTATTGGAGCAATGCCTGAAAATCTTGGGAACTTGACTAATTTGAAAGTTCTAGATCTCAGCTACAACAAAATAAGTGGGCAGATTCCGAGCAGCTTTGCTGAACTACAGAAAATGGACATGCTATTTTTAACTAGGAACCTTCTAACTGGACCACTGCCCGATTGGATATCTAAACCAGATTTTGTAGATCTCTCATTTAACAACTTCAGCATAAGAAAGTCAGAGGAGCCAGGTTGTCAACAGGGAAGCACGAACTTGTTTGCATCCTCCGTGAATGGCAATAGCATAGGAAATATTTCATGTCTGCAAAACACTGGCTGTACTAAAACTTGGTACTCTCTCTATATAAATTGTGGTGGAAAGCAAGTAGTTTCTATTGGAAATAAGACATATGATGATGATTCGGGTACGACTGGACCAGCAAGATTTCTCTCTGAAGGAACAAACTGGGCACTCATTACCACCGGTCACTTCTTCGACAGTGGTCGTGCAGACTACTACACATGGTCTACTACAAATAAACTTGCAATGGAAAATGATGAACTGTATAGGGATGCACGTGTTTCTCCCGTTTCTCTGACTTATTATGCATTTTGCCTGGGAAATGGAAACTACACAGTAAATCTTCATTTTGCGGAGATAATGTTTACAGATGATAAAACATATAGCAGTCTGGGAACGCGTGTATTTGACATCTACATTCAGAGAAAGTTAGTGTTGAAGGATTTCAATATTGCAAAGGAAGCAGGGGGTGTTGGGAAGGCAGTAATAAAAAATTTCACTGCTGTTGTGAATGCTAAAGCCTTGGAGATCCGTTTATATTGGGCTGGAAAAGGGACAACTACTATTCCATTTGGATCAGTATACGGTCCTCTTATATCAGCTATATCTGTTGATCCAGGTGGGCTGTACTTGTTCAAAGTTTCTTATTCGTGCCATCTCCTCCATTATCTAATCTTATCTAAAGTTCTTACATGTAACAAAGCAGATTTTGTACCACCTCCTCCTTCGGTGAATGGTGGTGGCTTGTCTGTAGGCGCTATTGTTGCCATTGTTGTTGCAGGAGCAATTATTATCATATTGATTTTTGGCATACTTTGGTGGAAGCACTGTTTTGAACAAAAAAGTTCAGTGCCTAAAGAACTCAAGGACATAAACTCACAAACTACCATATTCACATTAAGGCAAATAAGAGCAGCAACAAACAACTTTGATAGAGCCTTCAAGATTGGACAGGGAGGATTTGGTCCTGTGTACAAGGGTGTCTTATCAGATGGCACAAGAATTGCAGTTAAGCAACTTTCCGATAAATCAGTGCAAGGGAATCGTGAGTTTATAAATGAGATTGGAATGATTTCTGCCTTGCGGCACCCTTACTTGGTTAAACTCTATGGATTTTGTATGGAGGAGGATCAGTTGTTGCTTGTATATGAATACATGGAGAATAATAGCCTTGCACATGCTTTATTCGATGGAAATTATGACAGGAAAACTGAATTGAGATTACACTGGCAAACAAGACAGAGGATTTGTGTCGGTATTGCTAAAGGTTTGGCTTACCTTCATGGAGAATCAAGATTGAAGATCGTTCATAGGGACATTAAAGCCACCAATGTGTTGCTGGATAAAGATCTCAACCCGAAGATTTCAGATTTTGGTTTGGCCAAGCTTGATGAACAAAACAAAACACACATAAGCACCAGAATAGCGGGAACTTATGGGTACATCGCTCCGGAGTATGCGATGCATGGTTATTTGACGGACAAAGCTGATGTTTATAGTTTTGGAATAGTCGCTTTGGAAATAGTTAGTGGGAAGAGCAATACGCTTACCAACCCCACAGATGAATTCTTCTCTCTACTTGATTGGGCAAATCTCTTGAAAGAAAAAGGCAATCTGTTGGAACTTGTTGATGGGAGGTTGGGTGAAGACTTAAACAAAGAGGAGGCACTGGTGATGATCAAAGTGGCTCTTCTATGCACCAATGCCTCTCCGGTGCTCCGGCCCACCATGGCTTCAGTGGTAAGCATGCTTGAAGGAAGCACAGTTGTTCCAGATGTTATGCCAGGCACAAATGATTTATTGGATGAGAAGAAATTTGAGATGATGAGACAACATTACCAACAACATAGGGGAGAGAGAGAGATAAGTGAGACTCCAAGCTACGGTATCTCAGTTGGTGAAACTAGTGCAATTGTAACTGACACTGATTCTTCTTTTTTGAATGCCAGAGATTAA 3090 0.4049 MKLITIFFLSLLASPLVSGATLKQQEVEVLKEIGNTLGKKDWDFSVDPCSGERNWTSPASKSYSELNAVTCDCSFSNHTLCHVVSIVLKSQNLSGSLPPQLARLPYLQEIDLTLNYLNGTIPKQWSSLNLVNISLYGNRVTGSIPKELGNITTLKSLVLEFNQLSGNLPMELGSLPQIETLLLTSNNFTGELPASFANLTTLKNIRLGDNQFSGSIPNFIQNWRSVETMVIQGSGFSGPIPSGISLMKNLTDLRISDLNGSDSPFPQLDRITNLQTLMLRSCNIIGAMPENLGNLTNLKVLDLSYNKISGQIPSSFAELQKMDMLFLTRNLLTGPLPDWISKPDFVDLSFNNFSIRKSEEPGCQQGSTNLFASSVNGNSIGNISCLQNTGCTKTWYSLYINCGGKQVVSIGNKTYDDDSGTTGPARFLSEGTNWALITTGHFFDSGRADYYTWSTTNKLAMENDELYRDARVSPVSLTYYAFCLGNGNYTVNLHFAEIMFTDDKTYSSLGTRVFDIYIQRKLVLKDFNIAKEAGGVGKAVIKNFTAVVNAKALEIRLYWAGKGTTTIPFGSVYGPLISAISVDPGGLYLFKVSYSCHLLHYLILSKVLTCNKADFVPPPPSVNGGGLSVGAIVAIVVAGAIIIILIFGILWWKHCFEQKSSVPKELKDINSQTTIFTLRQIRAATNNFDRAFKIGQGGFGPVYKGVLSDGTRIAVKQLSDKSVQGNREFINEIGMISALRHPYLVKLYGFCMEEDQLLLVYEYMENNSLAHALFDGNYDRKTELRLHWQTRQRICVGIAKGLAYLHGESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEQNKTHISTRIAGTYGYIAPEYAMHGYLTDKADVYSFGIVALEIVSGKSNTLTNPTDEFFSLLDWANLLKEKGNLLELVDGRLGEDLNKEEALVMIKVALLCTNASPVLRPTMASVVSMLEGSTVVPDVMPGTNDLLDEKKFEMMRQHYQQHRGEREISETPSYGISVGETSAIVTDTDSSFLNARD 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01710 1029 ProSiteProfiles Protein kinase domain profile. 688 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01710 1029 Pfam Malectin domain 397 580 IPR021720 -
Aip08g01710 1029 ProSitePatterns Serine/Threonine protein kinases active-site signature. 813 825 IPR008271 GO:0004672|GO:0006468
Aip08g01710 1029 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 375 984 - -
Aip08g01710 1029 Pfam Leucine rich repeat 272 332 IPR001611 GO:0005515
Aip08g01710 1029 Gene3D Transferase(Phosphotransferase) domain 1 764 970 - -
Aip08g01710 1029 SUPERFAMILY L domain-like 65 388 - -
Aip08g01710 1029 Gene3D Ribonuclease Inhibitor 186 258 IPR032675 -
Aip08g01710 1029 Gene3D Phosphorylase Kinase; domain 1 652 763 - -
Aip08g01710 1029 Gene3D Ribonuclease Inhibitor 24 185 IPR032675 -
Aip08g01710 1029 ProSiteProfiles Leucine-rich repeat profile. 297 319 IPR001611 GO:0005515
Aip08g01710 1029 CDD STKc_IRAK 694 964 - -
Aip08g01710 1029 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 286 342 - -
Aip08g01710 1029 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 70 285 - -
Aip08g01710 1029 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 70 285 - -
Aip08g01710 1029 SUPERFAMILY Protein kinase-like (PK-like) 670 964 IPR011009 -
Aip08g01710 1029 Gene3D - 395 584 - -
Aip08g01710 1029 Pfam Protein kinase domain 692 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01710 1029 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 375 984 - -
Aip08g01710 1029 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 286 342 - -
Aip08g01710 1029 SMART serkin_6 688 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01710 1029 Gene3D Ribonuclease Inhibitor 259 380 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01710 Aip-Chr8 34554843 34564139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01710 16 968 Receptor kinase-like Gene Family AT1G53420 52.665 0.0 947
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g01710 Pkinase 3.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01710 - - ccaj:109799273 1337.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01710 08 34554843 34564139 Aip08g01710 08 34554843 34564139 ECH