Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01704 ATGAAACTCGTAACTCTCTTCTTCTTCTTCTTCTTCTTCTCTCTCTCGCTTCTTATTGCATCCTCATTTGTTTCTGCAGCCACTCTACAACAACAGGAAGTGCAAGTTCTTAAGGAGATAGGGAACACACTTGGGAAGAAAGATTGGGACTTCAGCGTAGATCCATGCAGTGGAGAACGTAACTGGGTTTCCCCTGCTTCTACACCTTCCTTGAAAAATTATGCTGTCACTTGTGATTGTTCTTTCTCTAATAACAATCTCTGCCATGTTGTTGGCATAGTTCTAAAAAGACAAAATCTAACTGGCACTCTTCCTCCGGAGTTTGCAAAGTTGCCTTACCTGCAAGAAATTGATCTCACTCTCAACTATCTTAACGGCACAATCCCAAAGCAATGGAGTTCCTTGAATGTTGTCAACATTTCCCTTTTTGGAAATCGAATAACAGGCTCAATTCCAAAGGAGCTGGGAAACATAACTACCCTGAAAAGTTTGTCCTTGGAATTCAATCAACTCTCTGGAGAGCTTCCTCCTGAGCTTGGGAATCTTTTGCAGCTTGAAAGATTGCATGTTAGCTCCAACTCTTTTACTGGGAATTTACCCACTACACTTGCTAGGCTCAGTAAATTGAATTACGTTCGACTCAGTGATAATCAATTTTCCGGAGCAATACCCAATTTTATTCAGAGCTGGACAAGTCTTCAGAGGCTGGTGATCCATGGGAGTGGTATGAGTGGACCAATGCCTTCTGGAATTTCATTTCTGAAAAACCTTACTGACTTGAGAATCAGCGACTTGAAAGGACCAGATTCTTATTTTCCACCACTTAGTAACTTGACAAACTTGCAAACACTAGTACTGAGAAGTTGCAATCTTATAGGATCGGTTCCTGAATATCTTGGAAATGTAACTACTTTAAACTCGTTAGACCTCAGTTTTAACAAGTTAAGTGGAAGTATCCCAAACTCCCTCCGTGTCCCAGAGAACATGAATATACTGTACTTAACTGGAAACTTTTTCACTGGACCACTGCCGAATTGGATTGCTAACCCGGACTACACGGATCTTTCATATAACAACTTCAGCATCGAAAAGCCAGAGCAGTTGACATGTCAACAAGGAACTGTAAACCTTTTTGCATCAGCTTTGAATGGAAATAACTCGGGAGCTTATCCATGTTTGGGGATCACCAACTGTCTTAAGCCTTCATACTCTCTCCATATAAATTGTGGTGGGAAGATCATAACTTATAATGGAAACATTACATATGATGAAGATTCACAAGAAGCTGGACCAGCAAAATCTCTTCGTAGTGGATCAAACTGGGCAGTTAGCAACACCGGTCACTTCTTTGATAGTGGTATTTCGGACTATTATACATGGTCTAACATGTCTAAGCTTGCTATGAACAATGCCGAACTGTACATGGATGCACGTGTTTCGGCGCTTTCTCTTACATATTATGGGTATTGCATGGGAAATGGAAGCTACACTGTAAATCTCCATTTTGCAGAGATAATGTTTACTGATGATCAAACATATAGTAGCCTTGGAAGGCGTGTATTTGACATATATATTCAGAGGAAGTTGTTGCTAAAGGATTTCGATATTGCAAAAGAAGCAGGAGGAGTCAGGAAGCCCATCATAAAAAATTTTACAGCTAATGTGACCAGTGGTACCTTGGAGATCCGCTTACAATGGGCCGGGAAAGGGACAACTGCCATTCCATTTGGATCAGTATATGGTCCTCTTATATCAGCTATATCTGTCAATCCAGACTTTACACCCCCACTGGAAAAAGAAAGTAACAAAAAAGGAAGTGGCATAGCTGTGGGGGCTATCATTGGAATTGTATTGGCTGGAGCACTTGTTATTGTCATGGCATTTGGTATAGCTTGGTGGAGAGGATGTTTACGACAAAAAGGTTCATTATATAGAGACCTACAGGGTTTGGATCTAAAAACTGGCATATTTACCTTAAGGCAAATCAAAGCAGCAACAAACAACTTTAGTGTTGCCTGCAAGATTGGAGAAGGAGGGTTCGGTCCAGTATATAAGGGTATTCTTCCAGATGGCACAGCAATAGCAGTTAAACAGCTTTCTTCTAGATCGAAGCAGGGGAATCGTGAGTTCACAAACGAGATTGGCATGATTTCTGCTTTGCAACACCCGTGTCTAGTTAAGCTCTATGGCTGTTGTATGGAGGGAGATCAAATGTTGTTGATATATGAATACATGGAAAACAACAGCCTTGCCAGTGCTCTGTGGGGCAAAGAGAAAACTCAATTGAAATTGGACTGGTCAACAAGGCGTAAGATTTGTATAGGCGTTGCTAAAGGCTTGGCTTACCTCCATGGAGAGTCAAGATTAAAAATAGTTCATAGGGACATCAAGGCTACTAATGTGTTGCTGGATAAAGATCTAAACCCAAAAATATCGGATTTCGGTTTGGCCAAGCTTGATGAAGAGGGTCAAACACACATAAGCACTAAAGTGGCTGGCACTTATGGATATATGGCACCCGAATATGCAATGCGTGGTTATTTGACGGACAAAGCAGATGTGTATAGTTTCGGAATTGTTGCCTTGGAAATAGTTAGCGGCAAAAGCAATAACATGGGCTGGCAAAGGGAAGAATGCTTCTCTCTTTTTGACTGGGCTCTTCTCTTGAAAGAGAAAGGTGATCTAATGGACCTAGTTGATGAGAAGTTGGGTTCACACTACAAAAAAGATGAAGCAATGCTCATCATCAATGTGGCTCTTCTCTGCACAAATACCTCTCCATTGAACCGGCCAACCATGTCGTCAGTGGTAAGCATGCTCGAAGGCAAAACCGCTGTACAAGAAGTAGTGCCGGACACGACGCAGGTATTTGGCGAGAAAAAGTTAGAGATGATCCGAGAGTATTACCAACAGAAGGGGAAAGATAAGATTCCAGACACTGAAGGTGTGAGCACATCAACTAATGAAACTGCTGCATTTGTGGCTAATTCAGAAGACAATTCAATCAACATGGATTCTTCTTATTGGGAAAGAAGTGGTAGATGA 3045 0.4144 MKLVTLFFFFFFFSLSLLIASSFVSAATLQQQEVQVLKEIGNTLGKKDWDFSVDPCSGERNWVSPASTPSLKNYAVTCDCSFSNNNLCHVVGIVLKRQNLTGTLPPEFAKLPYLQEIDLTLNYLNGTIPKQWSSLNVVNISLFGNRITGSIPKELGNITTLKSLSLEFNQLSGELPPELGNLLQLERLHVSSNSFTGNLPTTLARLSKLNYVRLSDNQFSGAIPNFIQSWTSLQRLVIHGSGMSGPMPSGISFLKNLTDLRISDLKGPDSYFPPLSNLTNLQTLVLRSCNLIGSVPEYLGNVTTLNSLDLSFNKLSGSIPNSLRVPENMNILYLTGNFFTGPLPNWIANPDYTDLSYNNFSIEKPEQLTCQQGTVNLFASALNGNNSGAYPCLGITNCLKPSYSLHINCGGKIITYNGNITYDEDSQEAGPAKSLRSGSNWAVSNTGHFFDSGISDYYTWSNMSKLAMNNAELYMDARVSALSLTYYGYCMGNGSYTVNLHFAEIMFTDDQTYSSLGRRVFDIYIQRKLLLKDFDIAKEAGGVRKPIIKNFTANVTSGTLEIRLQWAGKGTTAIPFGSVYGPLISAISVNPDFTPPLEKESNKKGSGIAVGAIIGIVLAGALVIVMAFGIAWWRGCLRQKGSLYRDLQGLDLKTGIFTLRQIKAATNNFSVACKIGEGGFGPVYKGILPDGTAIAVKQLSSRSKQGNREFTNEIGMISALQHPCLVKLYGCCMEGDQMLLIYEYMENNSLASALWGKEKTQLKLDWSTRRKICIGVAKGLAYLHGESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEGQTHISTKVAGTYGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGKSNNMGWQREECFSLFDWALLLKEKGDLMDLVDEKLGSHYKKDEAMLIINVALLCTNTSPLNRPTMSSVVSMLEGKTAVQEVVPDTTQVFGEKKLEMIREYYQQKGKDKIPDTEGVSTSTNETAAFVANSEDNSINMDSSYWERSGR 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01704 1014 Gene3D Ribonuclease Inhibitor 201 267 IPR032675 -
Aip08g01704 1014 Gene3D Ribonuclease Inhibitor 268 388 IPR032675 -
Aip08g01704 1014 CDD STKc_IRAK 675 942 - -
Aip08g01704 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 791 803 IPR008271 GO:0004672|GO:0006468
Aip08g01704 1014 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 77 291 - -
Aip08g01704 1014 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 385 962 - -
Aip08g01704 1014 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 291 366 - -
Aip08g01704 1014 SUPERFAMILY Protein kinase-like (PK-like) 655 941 IPR011009 -
Aip08g01704 1014 Gene3D Ribonuclease Inhibitor 46 136 IPR032675 -
Aip08g01704 1014 Gene3D Ribonuclease Inhibitor 137 200 IPR032675 -
Aip08g01704 1014 Gene3D - 400 592 - -
Aip08g01704 1014 SMART serkin_6 669 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01704 1014 Gene3D Transferase(Phosphotransferase) domain 1 745 955 - -
Aip08g01704 1014 SUPERFAMILY L domain-like 85 361 - -
Aip08g01704 1014 Gene3D Phosphorylase Kinase; domain 1 638 744 - -
Aip08g01704 1014 Pfam Protein tyrosine and serine/threonine kinase 672 940 IPR001245 GO:0004672|GO:0006468
Aip08g01704 1014 ProSiteProfiles Protein kinase domain profile. 669 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01704 1014 Pfam Malectin domain 404 587 IPR021720 -
Aip08g01704 1014 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 291 366 - -
Aip08g01704 1014 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 385 962 - -
Aip08g01704 1014 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 77 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01704 Aip-Chr8 34485342 34494353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01704 23 992 Receptor kinase-like Gene Family AT1G53420 52.965 0.0 976
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g01704 PK_Tyr_Ser-Thr 2.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01704 - - gmx:100786496 1458.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01704 08 34485342 34494353 Aip08g01704 08 34485342 34494353 ECH