Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01693 ATGGTGTTTGGTTTTTCCTTGCAGGAGACTGACATTGGGAGGCACGTGAATCGGTTGCGGAAGCATTCCTCCAATAACGTTCGCAGATTGGTGAAGCTACTTGTGAGGAAGTGGAAGGAAATTGTGGATGAGTGGGTGAGGTTGAATCAACCGGGTGGAACAGCTTCTCTCATGGCTGATGGGGACTCTCCACCGCTGAAAACCACCCAAAACGGTCATCATCAGGTAAGGAGTGTGACCCTTGTTGACCCTGTATCCTCAACTTCAGGAGCTCTCCCTATTTGTGTTCTGGAATACCCTGTGGGCAGGGATGGAGAAAAGGCAGTTGTCGCTATTGGGAATAAGCTAAATTATAGCTTTGATATCGCAGAATTGGGTGGTTCAGAGAACCTGAAAGCTGTGCCAATGCAAGTGTTGTGGTCTTCTGGTTGGTCTAAGGAATGGAGTGATGAGGGTAATCGAGTCGCTCGTGCTCTTCCATGGGCAAATTTTGTCACACATTCTGGAGGACGGTGGCCTCAGATCGGATATAGTAAGGTAGACATCCTCAGAAAGTGGGAAGCGGCGAATAATTTTGATGGACCAAGAATCTCAAGAAGCAAGTATATTGCCATCATCACTAAGAAGCTCAAGAAAGAATGA 642 0.472 MVFGFSLQETDIGRHVNRLRKHSSNNVRRLVKLLVRKWKEIVDEWVRLNQPGGTASLMADGDSPPLKTTQNGHHQVRSVTLVDPVSSTSGALPICVLEYPVGRDGEKAVVAIGNKLNYSFDIAELGGSENLKAVPMQVLWSSGWSKEWSDEGNRVARALPWANFVTHSGGRWPQIGYSKVDILRKWEAANNFDGPRISRSKYIAIITKKLKKE 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01693 213 Pfam TFIIS helical bundle-like domain 7 42 IPR017923 -
Aip08g01693 213 ProSiteProfiles TFIIS N-terminal domain profile. 1 45 IPR017923 -
Aip08g01693 213 CDD TFIIS_I 7 43 - -
Aip08g01693 213 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 5 52 IPR035441 -
Aip08g01693 213 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 6 81 IPR044790 -
Aip08g01693 213 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 7 51 IPR035441 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01693 Aip-Chr8 34206104 34208092 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Aip08g01693 Med26 1.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01693 - - aip:110265468 159.458