Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01690 ATGCTTCATCGGCGGCGCTATCATCCTTGCACCGCCGTCTCACCGAACTTCCATTGCACTCAACTTCCATCGGCCTTGCTCGCATCGCTCCCTTCCGTCGCACCCCTTCCCGGTTCTTCTTCGTCGCACCGCTTCGTCGGCCTTGCTTGCATCGCTCCCTTTCAAACCCTAATGTGTGTTTCTCTCTTTGATCTCGCCACTAGTGCTTGCTCTTTTCCGTGTGTTGCTGTGTTTCTCTCTTCGATCTTGCCTCAGCTGTGCAGGACCGAGAATCAAGATGCTATAGATGCCGCAACTGTTGGTGCTCTGTGCAGGGACTGTAGGAAACAAGTGTACTTGGTGTGTAAGTTTGATTTAATTTTCAAGGCATATGATCGAGCTGCGATCAAGTTCTGTGGCATTGATGCAGATATCAATTTCAACATCAGCGATTATGATGAAGATATAAAGCAGAGAAAAGCAGCATTGCCGTTGAGGGACGCAAAAAACGGCAATGCGAACAAGATGAAGGCTCTGGGCAAGCAATTGGACGCTATTCAAGATGTTTTCTTAGGAAGAGATTGTTTTTGTCTTATGCCTACTGGAGGAGGCAAGTCGATGTGTTATCAGATTCATGCACTGGCCAAAACAGGAATTGTGCTTGTTGTTTGTCCTTTAATAGCCTTAATGAAAAACCAAGTAATGGCATTAAAAGAGAAAGGTATTGATGCTGAATTTCTCTCCTCAACAATATCAACTGATGCAAAAAATAAGGCTGCTATATGTGACTCCAGAGTTGATAGCAACAGCGGGGTTTTCACTAAAATCAAGGTGCTTGTTATGAAGCCCGATGCTCTTCGGGCTGGGGTAAGTGCTAGTGATACTGTAAGGACACTTGGAGTTGCCCCAGCAATGGCGAATGAGCATCTTCTGTCTGCTGAGAGCAAGGGTTTGCTATGCAGAGATATAAGTCCGGATGGATTTCGTTTCTATATTAACCTGACTTCAGAGATTGCTGAGCAAGCAAAAAGACGTGATGGGGTTGCAAGGAAAGACCCATCCTTCAAACCACAAGGTGGCCAATTATGGGAAAATGATATGGACTATGATACTGATAAGAAGTCAATGGCAACACTTAGACGTCATCTTCGGGGAGCTACTGAGGAGTACTATAGATATAAAAGGTAA 1167 0.4516 MLHRRRYHPCTAVSPNFHCTQLPSALLASLPSVAPLPGSSSSHRFVGLACIAPFQTLMCVSLFDLATSACSFPCVAVFLSSILPQLCRTENQDAIDAATVGALCRDCRKQVYLVCKFDLIFKAYDRAAIKFCGIDADINFNISDYDEDIKQRKAALPLRDAKNGNANKMKALGKQLDAIQDVFLGRDCFCLMPTGGGKSMCYQIHALAKTGIVLVVCPLIALMKNQVMALKEKGIDAEFLSSTISTDAKNKAAICDSRVDSNSGVFTKIKVLVMKPDALRAGVSASDTVRTLGVAPAMANEHLLSAESKGLLCRDISPDGFRFYINLTSEIAEQAKRRDGVARKDPSFKPQGGQLWENDMDYDTDKKSMATLRRHLRGATEEYYRYKR 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01690 388 PANTHER DNA HELICASE RECQ FAMILY MEMBER 162 252 - -
Aip08g01690 388 Pfam DEAD/DEAH box helicase 175 281 IPR011545 GO:0003676|GO:0005524
Aip08g01690 388 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 251 IPR027417 -
Aip08g01690 388 MobiDBLite consensus disorder prediction 338 360 - -
Aip08g01690 388 Gene3D - 139 299 IPR027417 -
Aip08g01690 388 SUPERFAMILY "Winged helix" DNA-binding domain 269 329 IPR036390 -
Aip08g01690 388 PANTHER ATP-DEPENDENT DNA HELICASE Q-LIKE 3 162 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01690 Aip-Chr8 34045502 34050252 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01690 106 153 AP2-EREBP Transcription Factor Family AT2G39250 54.902 7.06e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01690 - K10901 aip:110265854 234.958