Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01689 ATGGGGAGCGTTCACAAAAATTCAACAAAGAGTTCTGTTGAATTTGATGATTTGAGTTTTGAGTATAGTGGTTCAAGTGAAGAAAATGATATAAGTATATCTCAAAAGAAGGGTACAATTGATGAAGCTATGAAAATGGTTGATCCTGGAGATGGATTTGGTGAAGTTGAGAAGAAGTTAACTGAGTTGACCAAGGATGACATTTGGGGTATTGAGCATGATAGTGTAGAGCAGTGTGTTCAATTCTACAAAAATTATGCCAAAGTACATGATTTTGTTGCAAGGTGTGATGAAAAGGGTTATGATTTCAACGACAACCTTAACATGAGACAAATGGTTTGTAATAGAGAGGGTACACGGAGAAAGAAGTATCTGGAGATGGAGAATAGAAAAAGAGACCACAGGCCGATAACACGTGTAATGTGTCAAGCCAGAATTAGATTTCACTATGATATGAAATTGAGGAAGTGGAAAGTCACTGCATTTGAAGAGACTCACAATCATGACCTTATCCTACCTAAATATATACAATTTGTCCCCGCATATCGTGTAACGACCGAGGCCGACAAAGCACATGCCAACAGTCTGCATGATTATGGTGTGAGAACTTGCCATATAATGGGGTTCATGTTAAAGCAAAAGGGAGGACCAGGAAAAATTGGTTTTACAAAGAAGGATTTGTATAATCATTTCGACAAATCAAAGCGTGCTAAAGTGAAAGATGGTGATGCATATGCAGCATTGAGTTACTTGATTTCTAAGGCCGATGAGGATCCATTGTTGCAAGGAAAATTTACTCTGAAAGATAATAAACTTGAAAATTTAGTATGGGCTGACGGAGCTAGCATAATTGATTATCAATGTTTTAGTGATGTACTAGCATTTGACACAACATACCAGAAGAATAAATATAACAAGCCATTGGTTGTCTTCTCAGGAACTAACCATCACGGTCAGACATGCATATTTGGTTGTGGCTTGCTAGCAGATGAGAAGCATGAGACATATGTATTAGTTTTGAAGATTTTTCTTGAAATAATGGGTAATAAACATCCAATAGCAGTGGTGACAGATGGTAATCTTGCAATGAGAGGAGCAATTAGAGAGGTGATGCCAAATGCAACGCACCGACTTTGTGCGTGGCATTTACATCGCAATACGTGTGAAGCTATCAAAAATTCTGAGTTCCTTCATGGATTGAAGCACCTTATGTACCGGAATTTTTTTCCGGATGAGTTTGAAGATAAAGGGCATCGATTAGTATCAAAATTCAAGCTTTCTGAAAACGAATGGGTGAAAAAAACATATGAGATCAAAAGGATACATCGAAAAGAAGCAGCCAATATTTTTACCCATAATATGTTTAAAGAGGTAAGGAATGAGATACTAGAAGTGAGTAAACTAAACGTTGTCGGCCATTCAAATAATGGTAACAAAATTGAGGTGAGAATGAACAAATATCAAGAGCCGGCTATTGAATATAAGGTTCGGTCTGATAGAAGTACTAACAACTTTGCTTGTGATTGTCGATTATTTGAGAGCCGTGGTATCCCTTGTTCCCATATTTTTTGTATTATGAGACATGATCATATTAGCACTATTCCTAATACTCTTATTCACAAGAGGTGGACGAAAGATGCTAAAAAAGAATACATTAGTTCACTTACCGCCGAGGATATTGAATCTAAAAAGATTGCTGGTGTTAGGTACGGTGCTCTAGCGACGCTTTATTTTACACTATGTGATAAAGCATCGAAACATCGAGATGACTTCATGGAAATCAGAGAAGACATTTTTGGATTGATTATGAAACTCCATAAAAGACACAATCCAAATGAGAAGCTTCCTTCTACTGCCAACTTGGTAGGTGACCCAAGTGTTGTGAAGACAAAAGGAGCCCCACGACAAACAACCAAGACTGCTAAGGCCGATATATCTGATGAGGAAACAATACACCAATGTAACAAAAAACGCAGTGATTTATTTGAAAATATCCAGAAAAAAGTGAATAAGCCTCATGTCCAATCTATAGAAGTTCAAAGCAACTACTACAATGATAACAAAATAGAAAAGCCTAGTGCACAAACAAAAATAAATACACCTGAAGCTGCTTTTGAGAGTAGAAAACCAAATAAAGAAGATCATCAAGAAGTGTCCACCGAAATTGAAACTTATGGTGCTATATCCTCTACAAAGGGTTTTGAGAATTTTCAATACATGAGTGGATTACCTATGTACCCTAGTTTTAATAGATATCCCATGCCACCTTGTTATTCATACAGTGGAGGTGGAATACCCATGTTCCAGATAAATCCTTCACACGCTAATGTACCAAATTACTACGATTATTGGAATGCAAGAGTTCAAGATTTTAACAAGAAGAAGAATTAA 2391 0.368 MGSVHKNSTKSSVEFDDLSFEYSGSSEENDISISQKKGTIDEAMKMVDPGDGFGEVEKKLTELTKDDIWGIEHDSVEQCVQFYKNYAKVHDFVARCDEKGYDFNDNLNMRQMVCNREGTRRKKYLEMENRKRDHRPITRVMCQARIRFHYDMKLRKWKVTAFEETHNHDLILPKYIQFVPAYRVTTEADKAHANSLHDYGVRTCHIMGFMLKQKGGPGKIGFTKKDLYNHFDKSKRAKVKDGDAYAALSYLISKADEDPLLQGKFTLKDNKLENLVWADGASIIDYQCFSDVLAFDTTYQKNKYNKPLVVFSGTNHHGQTCIFGCGLLADEKHETYVLVLKIFLEIMGNKHPIAVVTDGNLAMRGAIREVMPNATHRLCAWHLHRNTCEAIKNSEFLHGLKHLMYRNFFPDEFEDKGHRLVSKFKLSENEWVKKTYEIKRIHRKEAANIFTHNMFKEVRNEILEVSKLNVVGHSNNGNKIEVRMNKYQEPAIEYKVRSDRSTNNFACDCRLFESRGIPCSHIFCIMRHDHISTIPNTLIHKRWTKDAKKEYISSLTAEDIESKKIAGVRYGALATLYFTLCDKASKHRDDFMEIREDIFGLIMKLHKRHNPNEKLPSTANLVGDPSVVKTKGAPRQTTKTAKADISDEETIHQCNKKRSDLFENIQKKVNKPHVQSIEVQSNYYNDNKIEKPSAQTKINTPEAAFESRKPNKEDHQEVSTEIETYGAISSTKGFENFQYMSGLPMYPSFNRYPMPPCYSYSGGGIPMFQINPSHANVPNYYDYWNARVQDFNKKKN 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01689 796 ProSiteProfiles Zinc finger SWIM-type profile. 494 530 IPR007527 GO:0008270
Aip08g01689 796 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 73 440 IPR031052 GO:0006355
Aip08g01689 796 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 444 597 IPR031052 GO:0006355
Aip08g01689 796 SMART 26again6 505 532 IPR006564 GO:0008270
Aip08g01689 796 Pfam MULE transposase domain 292 386 IPR018289 -
Aip08g01689 796 MobiDBLite consensus disorder prediction 612 644 - -
Aip08g01689 796 PANTHER OS02G0262500 PROTEIN 444 597 - -
Aip08g01689 796 PANTHER OS02G0262500 PROTEIN 73 440 - -
Aip08g01689 796 Pfam FAR1 DNA-binding domain 81 170 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01689 Aip-Chr8 34037373 34040477 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g01689 MULE 6.8e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01689 - - ahf:112748201 1181.39