Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01686 ATGGGGAGCGTTCACAAAAATTCAACAAAGAGTTCTATTGAATTTGATGATTTGAGTTTTGAGTATAGTGGTTCAAGTGAAGAAAATGATATAAATATATCTCAAAAGAAGGGTACAATTGATGAAGCTATGAAAATGGTTAATCGTGGAGATGGATTTGGTGAAGTTGAGAAGAAGTTAACTGAGTTGACCAAGGATGACATTTGGGGTATTGAGCATGATAGTGTAGAGCAGTGTGTTCAATTCTACAAAAATTATGCCAATGTACATGGTTTTGTTGCAAGGTGTGATGAAAAGGGTTATGATTTCAACGGCAACCTTAACATGAGACAAATGGTTTGTAATAGAGAGGGTACACGGAGAAAGAAGTATCTGGAGATGGAGAATAAGAAAAGAGACCACAGGCCGATAACACGTGTAATGTGTCAAGCCAGAATTAGATTTCACTATGATATGAAATTGAGGAAGTGGAAAGTCACTGCATTTGAAGAGACTCACAATCATGACCTTATCCCACCTAAATATATACAATTTGTCCCTGCATATCGCGTAATGACCGAGGCCGACGAAGCACAAGCCAACAGTCTGCATGATTTGGTTGTGGCTTGCTAG 612 0.384 MGSVHKNSTKSSIEFDDLSFEYSGSSEENDINISQKKGTIDEAMKMVNRGDGFGEVEKKLTELTKDDIWGIEHDSVEQCVQFYKNYANVHGFVARCDEKGYDFNGNLNMRQMVCNREGTRRKKYLEMENKKRDHRPITRVMCQARIRFHYDMKLRKWKVTAFEETHNHDLIPPKYIQFVPAYRVMTEADEAQANSLHDLVVAC 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01686 203 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 11 182 - -
Aip08g01686 203 Pfam FAR1 DNA-binding domain 81 171 IPR004330 -
Aip08g01686 203 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 11 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01686 Aip-Chr8 34012249 34012860 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g01686 FAR1 1.7e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01686 - - aip:107610855 424.091