Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01675 ATGACAAGTATCACTGATCCGTTGAGCGCCTCATACTCTTTCCGTATAAATTGTGGTGGAAGAAAGGTAACAATAAATGGAAAGACATATGATGATGACACAGATGAAGGAGGAGCAGCAAAGTTCTATCACAATGAAAATACAAATTATTGGGCATTCAGTAGTACCGGTAACTACTTGGAAAGTAAAACTCCGCCAAACTATATTCCATCTATTGAGTCCAGTACGCTCTCTTTAAACAATAACAATGATGCTGAGCTCTACACCAATGCACGTGCATCTCCTGTTTCTTTGACTTACTATGGATTTTGCCTTGGAAATGGAAACTACATTGTGGATCTGCATTTTGCTGAGATTGTGTTTACTCATGATCAAACATATAAGAGCCTTGGAAGGCGTATATTTGACATCTACATTCAGGGAAACCTAGTGCGAAAGGACTTCAACATTGCAGAAGAAGCAGGAGGCATAGGTAAAAAAGTTATAAAATCGTTCAATGCAAGTGTGATTAATGGTACCTTAGAGATTCGTTTTTACTGGGCTGGCAAAGGAACAACTGCTATCCCACAAAAATCAATTTATGGTCCTCTTATATCAGCCATATCTGTCTATCGTGATCATAGAAGTGGAATATCAACAGCTGCTGTGGTTGGAATTGTTGTTGCCGTGGCAATTATTATCATCTTGTTGATATTTGGCATGCTTTGGTGGAAAGGCTGTTTGGGAAAGAGAAATTCAAAAGAATTAAAGGGTATAGATTTGCAAACTGGTATGTTTTCTGTACGACAAATCAAAATAGCAACAAATAACTTTGATATCATCAACAAGATTGGAGAAGGAGGATTTGGTCCCGTGTATAAGGGAAAGTTACCTAATGGTACAATAATCGCAGTCAAGCAACTTTCTTCAAAATCAAAGCAAGGGAATCGTGAATTCTTAAATGAAATAGGCATGATTTCTGCTTTACAACATCCTTGTCTCGTTAAACTCTATGGATGTTGTGTTGAGGGAGATCAGTTATTTTTGATATATGAATACATGCAAAACAATAGTCTTGCTCGTGCTTTATTCGGCCGTGAAGAACACCAAATAAAGTTGGATTGGCAAACAAGACATAAGATTTGTGTTGGTATTGCTCGAGGATTAGCATACCTCCATGAAGAGTCAAGAGTGAAGGTGGTTCATAGAGATATCAAAGCCACTAATATCTTGCTCGATGAATATCTCAACCCTAAAATATCTGATTTTGGTTTGGCTAAACTTGACGAAGAAGACAACACCCATATTAGCACTCGTATTGCTGGCACATATGGATATATGGCTCCAGAATATGCAATGCATGGTCAATTAACCGATAAAGCAGATGTATATAGTTTTGGAATTGTTGCCTTAGAAATTGTAAGTGGAAGAAATAATACAACCAACCAACATAGTGAAGGGGCATTCGTTTTACTTGATTGGGCACGTTTGCTGAGAGAGAAAGGTGATATAATGGAAATAGTTGATAGAAGATTATTGGATTCAAACTTGAAGAAAGAGGAGGTGATGGTGATGATCAATGTTGCTTTCTTATGCACTAATGTGTCTCCAACACTTAGGCCTACTATGTCTTCAGTAGTAAGCATGCTAGAAGGCAAAACCATTGTTCCAGAATTAGCTTCAGAGTCATTGGATGAGAAGAAATTGGAAGCATTGGAAATGTATTATCACCAAGATCACCAAAGTACCTCAACAATGGAGGTGCCATTGACTACTTCATCTACTTCTACAGCACAAGATTTGTATTCGATTCACCTAGACTCTTCTTATTTTGAGAGTAGAAATTAG 1827 0.376 MTSITDPLSASYSFRINCGGRKVTINGKTYDDDTDEGGAAKFYHNENTNYWAFSSTGNYLESKTPPNYIPSIESSTLSLNNNNDAELYTNARASPVSLTYYGFCLGNGNYIVDLHFAEIVFTHDQTYKSLGRRIFDIYIQGNLVRKDFNIAEEAGGIGKKVIKSFNASVINGTLEIRFYWAGKGTTAIPQKSIYGPLISAISVYRDHRSGISTAAVVGIVVAVAIIIILLIFGMLWWKGCLGKRNSKELKGIDLQTGMFSVRQIKIATNNFDIINKIGEGGFGPVYKGKLPNGTIIAVKQLSSKSKQGNREFLNEIGMISALQHPCLVKLYGCCVEGDQLFLIYEYMQNNSLARALFGREEHQIKLDWQTRHKICVGIARGLAYLHEESRVKVVHRDIKATNILLDEYLNPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMHGQLTDKADVYSFGIVALEIVSGRNNTTNQHSEGAFVLLDWARLLREKGDIMEIVDRRLLDSNLKKEEVMVMINVAFLCTNVSPTLRPTMSSVVSMLEGKTIVPELASESLDEKKLEALEMYYHQDHQSTSTMEVPLTTSSTSTAQDLYSIHLDSSYFESRN 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01675 608 Gene3D Phosphorylase Kinase; domain 1 238 346 - -
Aip08g01675 608 Pfam Protein kinase domain 272 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01675 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 393 405 IPR008271 GO:0004672|GO:0006468
Aip08g01675 608 Gene3D Transferase(Phosphotransferase) domain 1 347 559 - -
Aip08g01675 608 Pfam Malectin domain 13 201 IPR021720 -
Aip08g01675 608 CDD STKc_IRAK 277 545 - -
Aip08g01675 608 SMART serkin_6 271 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01675 608 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 10 576 - -
Aip08g01675 608 SUPERFAMILY Protein kinase-like (PK-like) 254 547 IPR011009 -
Aip08g01675 608 ProSiteProfiles Protein kinase domain profile. 271 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01675 608 Gene3D - 8 208 - -
Aip08g01675 608 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 10 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01675 Aip-Chr8 33403764 33408726 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01675 13 591 Receptor kinase-like Gene Family AT1G53420 58.010 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g01675 Pkinase 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01675 - - ahf:112703562 995.342
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01675 08 33403764 33408726 Aip08g01675 08 33403764 33408726 ECH