Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01673 ATGGTTATTGCTGAAGGGAGGCTGTGGCGTTCAAGGATACTTTCCTCCAACAATTTTACGGGAGAGCTACCTGCAACACTTGCCAAGCTCACTAACTTGCAGGATATTCGACTTGGGGACAATCAATTCTCTGGAAAGATTCCTGATTTTATTGAAAGCTGGACAAATCTCAAAGCATTAAATATTATAGGGAGTGGACTAAGTGGACCAATTCCTTCTGGTATTTCAAAATTGAGAAACTTAACTGACTTGAGAATAAGTGATCTGAGTGGATCTGAAATTTCAAGTTTTCCGGATCTTAGTAATAAGTCGATGAAGTATCTGATTCTAAGGAACTGCAACATTCATGGAACACTAAAGGATTACCTCTCAACAACAGAAATATCACAAATCTTAGACCTCAGCTTTAACAAATTGACTGGACCAATTCCACCTTCCTATAAGGAGCTTATAAAAGTGAATTACATATTCTTAACTGGAAATCTTCTCAACGGATCAGTGCCTTCATGGAAGAGTGATGCTACCAGCTTAGATCTTTCATATAACAACTTCAACAAAGATAATCAGCAGTGTCAATATGGAAAAGTGAACTTGTTTGCTGCTAGCTCTCCGACAATTAACAATTCAGGAATTGTTTCTTGTTTGAGAAGCTCTGTCTCTGGTTGTCCTAAAGTCAATTCTATCCACATAAATTGTGGAGGAACATCATCAGTAAAAGTGAAGGGAATCACATATGATGAAGATGGACGTGATGGGACAGCATTGTTCGACAGAGGTCAAAACAAAAACTGGGCAGTTAGCACCACCGGTGACTACATGGATGTAGAAGCAGAGTATTCTACTGCCTCTTTAAATGACACTTCTGCCCTCTCTTCCAATGATGCTTATCACCAACTATACAACGATGCACGAGTTTCTCCTATTTCTCTAACTTACTATGGATTTTGCCTTCATAATGGAAACTACAAAGTCAAGCTCCATTTTGCTGAGATCATGTTCACCAATGATCAAACCTATAAAAGCCTTGGAAGGCGTCTATTTCACATCTACATTCAGGGAACGTTGGTGGAGAAGGATTTTAATATTGCAAAAGAAGCAGGAGGTGTCGGTAAGGCAATCATAAAAGCTTACACAGCAGCTGTCATTAATAATACCATTGAGATTCGATTTTATTGGGCTGGAAAAGGGACAACCATAATCCCAAAGAAATCAGTGTATGGTCCTCTTATATCAGCCATATCTGTGGAGAATGAAAATGGAGGTAGCATATCAACAGGGGCTGTGATTGGAATTGTTGCTGCAGTGGTAATTATCATCATCATCTTAGTACTAAGTGTGCTTTGGTGGAAGGGCTACCTAGGAAACAAAAACTCTCCTTCAAGAGAATTTACAAGTTTAGATATCCAAACAAGTTTATTTTCTTTACGCCAAATCAAAATAGCAACAAATAATTTTGATATATCCAACAAGATTGGAGAAGGAGGATTTGGCCCCGTGTACAAGGGAGAGTTATCTAATGGTATAGTAATAGCAGTAAAGCAGCTTTCTTCAAAATCAAGGCAAGGGAATCGAGAGTTCTTAAATGAAATAGGCATGATTTCTGCTTTACAACATCCTTGTCTCGTTAAACTCTATGGATGCTGTGTTGAAGGAGATCAACTGTTGTTGGTATATGAATACATGCAAAATAATAGTCTTGCTCGTGCTTTATTTGGTCCAAAGGAACACCAAATAAAATTGGACTGGCCAACAAGACAGAACATTTGTATTGGTATTGCTAGAGGCTTAGCATACCTCCATGAAGAATCAAGATTGAAGATAGTTCATAGAGACATTAAAGCCACAAATGTCTTGCTTGATAGAGATCTTAATCCGAAGATATCTGATTTTGGTTTGGCCAAACTTGATGAAGAGGACAATACCCATATTAGCACCCGAATAGCAGGAACATATGGATATATGGCTCCAGAATATGCAATACATGGTTATTTAACTGACAAAGCAGATGTCTATAGTTTTGGAATTGTTGCTTTGGAAATCATTACTGGGAAGACTAATACTACTCTGCGGCAGAAAGAAGAAGTAATTTATCTGCTTGATCTGGCACGTTTGTTGAAAGAGAAAGGCAATCTAATGGAGCTAGTTGATAGAAGATTGGGCTCAAACTTTGATAAAGAGGAAGCCATGATAATGATTAAGGTGGCTCTCCTATGTACTAATGTGTCTGCAACACTTAGACCAAACATGTCTTCAGTGGTAAGTATGTTAGAAGGCAAAATTATAGTTCAAGAACCAATTTTTGATAAGCCAAGTGAGGCATTGGATGAGAAGAAATTGGAAGCAATGAGATTGTATTGTTTTGAAGATCAAAGTATTTCAACGGAGGATCCATGGACTACTTCGTCTACTTCTGCAAGAGATTTGTATCCATTAAATTTGGACTCTTCTTACTTAGAGAAGAGAGAATATCAAAATTATTAA 2481 0.3777 MVIAEGRLWRSRILSSNNFTGELPATLAKLTNLQDIRLGDNQFSGKIPDFIESWTNLKALNIIGSGLSGPIPSGISKLRNLTDLRISDLSGSEISSFPDLSNKSMKYLILRNCNIHGTLKDYLSTTEISQILDLSFNKLTGPIPPSYKELIKVNYIFLTGNLLNGSVPSWKSDATSLDLSYNNFNKDNQQCQYGKVNLFAASSPTINNSGIVSCLRSSVSGCPKVNSIHINCGGTSSVKVKGITYDEDGRDGTALFDRGQNKNWAVSTTGDYMDVEAEYSTASLNDTSALSSNDAYHQLYNDARVSPISLTYYGFCLHNGNYKVKLHFAEIMFTNDQTYKSLGRRLFHIYIQGTLVEKDFNIAKEAGGVGKAIIKAYTAAVINNTIEIRFYWAGKGTTIIPKKSVYGPLISAISVENENGGSISTGAVIGIVAAVVIIIIILVLSVLWWKGYLGNKNSPSREFTSLDIQTSLFSLRQIKIATNNFDISNKIGEGGFGPVYKGELSNGIVIAVKQLSSKSRQGNREFLNEIGMISALQHPCLVKLYGCCVEGDQLLLVYEYMQNNSLARALFGPKEHQIKLDWPTRQNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAIHGYLTDKADVYSFGIVALEIITGKTNTTLRQKEEVIYLLDLARLLKEKGNLMELVDRRLGSNFDKEEAMIMIKVALLCTNVSATLRPNMSSVVSMLEGKIIVQEPIFDKPSEALDEKKLEAMRLYCFEDQSISTEDPWTTSSTSARDLYPLNLDSSYLEKREYQNY 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01673 826 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 13 778 - -
Aip08g01673 826 Gene3D Phosphorylase Kinase; domain 1 453 560 - -
Aip08g01673 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
Aip08g01673 826 Gene3D Ribonuclease Inhibitor 8 219 IPR032675 -
Aip08g01673 826 Pfam Protein tyrosine and serine/threonine kinase 487 701 IPR001245 GO:0004672|GO:0006468
Aip08g01673 826 SUPERFAMILY Protein kinase-like (PK-like) 459 757 IPR011009 -
Aip08g01673 826 SUPERFAMILY L domain-like 14 184 - -
Aip08g01673 826 CDD STKc_IRAK 491 758 - -
Aip08g01673 826 Gene3D - 226 419 - -
Aip08g01673 826 SMART serkin_6 485 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01673 826 Gene3D Transferase(Phosphotransferase) domain 1 561 766 - -
Aip08g01673 826 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 13 778 - -
Aip08g01673 826 Pfam Malectin domain 227 413 IPR021720 -
Aip08g01673 826 ProSiteProfiles Protein kinase domain profile. 485 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01673 Aip-Chr8 33296508 33315642 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01673 13 794 Receptor kinase-like Gene Family AT1G53420 56.981 0.0 868
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g01673 PK_Tyr_Ser-Thr 2.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01673 - - cam:101501658 1063.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01673 08 33296508 33315642 Aip08g01673 08 33296508 33315642 ECH