Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01670 GACCAATAATAGTTCTTATTATCTACATATTCAGTGGTGAGAGTGGAGCAGGGAAGACTAAGACAGCAAAGATAGCAATGCAGTACTTGGCTGCCCTTAGTGGTGGAAGTGGAATAGAGTATAAGATATTGAAGACTAATCCAATACTAGAAGCCTTTGCGGCAGCGGCTAAAAGAGGAGGCAAGGCGGCTGCTTCGTTGAAGGAGTCGGCATCAGCTTCAGCCTCGGAGAAGGCAGTCGACCAGCTCACCAACGGTGTTGGAGATATTGTAGTTGAAAGAGAACTAAAGCTATTAAAATTTCAATTAAACAACTCAACAAATCTATCTCTTGGATATAATAGCTCCTTGTTAGAAACTAGAAGATCAAAGGGAGATTTTTTTGAACCATTACCTGTGAAGCAGGGGAAGAAGCACATTAGTACACCTATTCCACATGATTCATACTCTGTTCTTTCTGTGAGCAGTTCTGGAAAGTTTGGGATAAGAGAAATTTCACTTATAATAAATGTGCAGGCCTTGGATTCAATTGGATTCTCTGGAACACTTTCTCCCTCAATTCTCAAATTGAAATATCTAGTTACCTTGGAATTGCAGAACAACAAACTTTCAAGCCCCTTGCCTGATTACATTGCCAACTTGACTACCTTGAAATATCTGAATCTTGCTAGCAATAACTTCATTGGCTCTGTACCAGCTTCATGGGCTCAACTTTCAACTCTCAAACATTTGGATCTTTCATCAAATCGTCTCACTGAAACTATCCCATTGCAACTCTTTTCAATTCCAGTGTTCAAGTATGTTTCTGTGCACGACATATTGAAGAAAGCTCAGCTTCTTTCCCCTCGTGCTATGGTTGTTGATTCAATACAAACTCTTTATCCTGTTAACACTTGGCCAGACAAAAAAGCCTATAATAAGACACTCTTGAAGCTTACTGGGTTGTTTCAGAGGAATCTTGAGACATTCACCAATCACAAGATTGGTAAGGACAACAAACTCACTGAAGAGATTTTGGCAGCTGGAtga 1028 0.3998 PIIVLIIYIFSGESGAGKTKTAKIAMQYLAALSGGSGIEYKILKTNPILEAFAAAAKRGGKAAASLKESASASASEKAVDQLTNGVGDIVVERELKLLKFQLNNSTNLSLGYNSSLLETRRSKGDFFEPLPVKQGKKHISTPIPHDSYSVLSVSSSGKFGIREISLIINVQALDSIGFSGTLSPSILKLKYLVTLELQNNKLSSPLPDYIANLTTLKYLNLASNNFIGSVPASWAQLSTLKHLDLSSNRLTETIPLQLFSIPVFKYVSVHDILKKAQLLSPRAMVVDSIQTLYPVNTWPDKKAYNKTLLKLTGLFQRNLETFTNHKIGKDNKLTEEILAAG 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01670 341 Pfam Leucine rich repeat 192 250 IPR001611 GO:0005515
Aip08g01670 341 Pfam Myosin head (motor domain) 9 55 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip08g01670 341 ProSiteProfiles Myosin motor domain profile. 1 341 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip08g01670 341 ProSiteProfiles Leucine-rich repeat profile. 239 260 IPR001611 GO:0005515
Aip08g01670 341 PANTHER LRR RECEPTOR-LIKE KINASE 171 270 - -
Aip08g01670 341 SUPERFAMILY L domain-like 173 269 - -
Aip08g01670 341 Gene3D Kinesin motor domain 9 55 IPR036961 -
Aip08g01670 341 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 55 IPR027417 -
Aip08g01670 341 Gene3D Ribonuclease Inhibitor 153 280 IPR032675 -
Aip08g01670 341 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 171 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01670 Aip-Chr8 33060579 33069454 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01670 9 55 Myosins gene family AT1G50360 87.234 1.12e-18 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01670 - - gmx:100799227 144.821