Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01669 ATGATTATTGATAAAATTAAAAAAGAACGAAAGAAAGATAAACTAGAGTACATCACATTCCAACGGAAAGCTTTTGGAGCTACCCAGCTGCCAGAAAATGAAGTACAAGCTCTGCAAATCATAGCAAAGACACTTGGGATCAAGAATTGGAATCCTAGCGCTGATGAATGCAATAAGCTGGTGGGACAAAATAATTGGACTTCATGTTCGGAATTCAAAGATGATGAATATCAGAATGTTGTCATCTGCAATAATTGCTCCAGTGACACCGTTTGTCATGTCACTAATCTATGTATGAAACGACAAAATCTCGCGGGTACACTTCCGCCAGAACTAGTGAGGTTGCCTTACCTTCAAGAAATTGATCTTACTTTTAACTACCTGAATGGCACAATTCCTACGGAATGGGGCTCCATGAATCTTCTCAACATCTCTCTTGGAGGAAATCGGTTAACTGGCCCAATACCAAAAGAGATAGCCAACATATCCACTCTCCAAAATCTTGTTGTGGAGTCCAATCAAATGTATGGAGATCTTCCCCTTGAGCTTGGGAATCTGACGCAGATTCAAAGACTGTTACTTTCCTCCAACAATTTTACAGGAGAGCTACCTGCAACACTTGCCAAGCTCACTAACTTACAGGATATTCGATTTGGGGATAATCAATTCTCTGGAAAGATTCCTGATTTTATTGAGAGCTGGACAAGTCTCAAAATATTGAATATTATAGGGAGTGGACTAAGTGGGCCAATTCCTTCTGGTATTTCAAAATTGAGAAACTTAACTGACTTGAGAATAAGTGATTTGAGTGGATCTGAAATTTCAAGTTTTCCCGAACTTAGTACTAAGTCGATGAAATATCTGATTTTAAGGAGTTGCAACATTCATGGAACACTAGAGGATTATCTCTCAACAACGACAATATCACAAATCTTAGACCTCAGCTTTAACAAATTGACTGGACCAATTCCACCTTCCTATAAGAAGCTGACAAAAGTGAATTACATATTCTTAACTGGAAACCTTCTCAATGGATCAGTGCCTTCATGGACGAGTGATGCTACCAGCTTAGATCTTTCATATAATAACTTCAACCAAGATAATCAGCAGCAATGTCAATCTGGAAAAGTGAACTTATTTGCTGCTACCTCTCCGACAATTAACAATTCAGGAATTGTTTCATGTTTGAGAAGCTCTGTCTCTGGTTGTTCTAAAGATACAGATGAAGGGACAGCATTGTTTACCAAAGGTCAAAATAGAAACTGGGCAATTAGTACCACCGGTGACTACACGGATGTAGAAAAAGAGTATTCTACTTTCTCATTGAATAACACTTCTGGCCTCGCTTTCAATGATGCTTATGGCCAACTATACAAAGATGCACGTGTTTCTCCTATTTCTCTAACGTACTATGGATTTTGCCTTCATAATGGAAACTACAAAGTCAAGCTCCATTTCGCCGAGATCATGTTCACCAATGATCAAACCTATAAAAGCCTTGGAAGGCGTCTATTTCACATCTACATTCAGGGAACATTGGTGGAAAAGGATTTTAATATTGCAAAAGAAGCAGGAGGTGTTGGTAAGGGAATCATAAAAACTTACACAGCAGCTGTCACTAATAATACCATTGAGATTCGATTTTATTGGGCTGGAAAAGGGACAACTACAATCCCACAGAAATCAGTGTACGGTCCTCTTATATCAGCCATATCTGTGGAGAATGAAAATGGAGGTAGCATATCAACAGGGGCTGTGATTGGAATTGTTGCTGCAGTGTTAATTATCATCATCATCTTAGTACTTAGTGTGCTTTGGTGGAAGGGATACCTAGGAAAGAAACACTCTCCTTCAAGAGAGCTTATGAGTTTAGATATACAAACAAGTTTATTTCCCCTAAGACAAATCAAAGCAGCAACAAATAATTTTGATATCACCAATAAAATTGGAGAAGGAGGATTTGGTCCTGTGTACAAGGGAAAGTTACCTAATGGTACAATAATCGCAGTGAAACAACTTTCTTCAAAATCAAGGCAAGGAAATCGTGAATTCTTAAATGAAATAGGTGTAATTTCTGCTTTACAACATCCTTGTCTTGTTAAACTCTACGGATGCTGTGTTGAAGGAGATCAATTATTATTGGTATACGAGTACATGGAAAACAATAGTCTTGCTCGTGCGTTATTTGGTCCAAAGGAACACCAAATACAATTGAATTGGCCAACAAGACAGAACATTTGTATTGGTATTGCTAGAGGCTTAGCATACCTCCATGAAGAATCGAGATTGAAGATAGTTCATAGAGATATTAAAGCCACAAATGTCTTGCTTGATAGAGATCTTAATCCAAAGATATCGGATTTTGGTTTGGCCAAACTTGATGAAGAAGACAATACCCACATTAGTACCCGAATAGCAGGAACATATGGATATATGGCTCCCGAATATGCAATGCATGGTTATCTGACTGACAAAGCAGATGTCTATAGTTTTGGAATTGTTGCTTTGGAAATCATTACTGGAAAGACTAATACAACTATGAGGCAAAAAGAAGATGTAATTTATCTGCTTGATTTGGCACGTTTATTGAAAGAGAAAGGCAATCTAATGGAATTAATTGATAGAAGATTGGGATCAAACTTTGATGAAAAGGAAGCCATGGTAATGATTAAGGTGGCTCTATTATGCACTAATGTGTCTCCAGCACTTAGACCAAACATGTCTTCAGTGGTAAGCATGTTAGAAGGAAAAACTATAGTTCAAGGACCAACTTTTGATGAGCAAAGTGAGGGATTGGATGAGAAGAAATTGGAGGCAATGAGATTGTATTGTTTTGAAGACCAAAGTATCTTAACAGAGGATCCATGGACTACTGCATCTACTTCTACAAAAGATTTGTATCCATTACATTTGGACTCTTCTTACTTAGAAAAGAGAAATCATTAG 2946 0.3771 MIIDKIKKERKKDKLEYITFQRKAFGATQLPENEVQALQIIAKTLGIKNWNPSADECNKLVGQNNWTSCSEFKDDEYQNVVICNNCSSDTVCHVTNLCMKRQNLAGTLPPELVRLPYLQEIDLTFNYLNGTIPTEWGSMNLLNISLGGNRLTGPIPKEIANISTLQNLVVESNQMYGDLPLELGNLTQIQRLLLSSNNFTGELPATLAKLTNLQDIRFGDNQFSGKIPDFIESWTSLKILNIIGSGLSGPIPSGISKLRNLTDLRISDLSGSEISSFPELSTKSMKYLILRSCNIHGTLEDYLSTTTISQILDLSFNKLTGPIPPSYKKLTKVNYIFLTGNLLNGSVPSWTSDATSLDLSYNNFNQDNQQQCQSGKVNLFAATSPTINNSGIVSCLRSSVSGCSKDTDEGTALFTKGQNRNWAISTTGDYTDVEKEYSTFSLNNTSGLAFNDAYGQLYKDARVSPISLTYYGFCLHNGNYKVKLHFAEIMFTNDQTYKSLGRRLFHIYIQGTLVEKDFNIAKEAGGVGKGIIKTYTAAVTNNTIEIRFYWAGKGTTTIPQKSVYGPLISAISVENENGGSISTGAVIGIVAAVLIIIIILVLSVLWWKGYLGKKHSPSRELMSLDIQTSLFPLRQIKAATNNFDITNKIGEGGFGPVYKGKLPNGTIIAVKQLSSKSRQGNREFLNEIGVISALQHPCLVKLYGCCVEGDQLLLVYEYMENNSLARALFGPKEHQIQLNWPTRQNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIITGKTNTTMRQKEDVIYLLDLARLLKEKGNLMELIDRRLGSNFDEKEAMVMIKVALLCTNVSPALRPNMSSVVSMLEGKTIVQGPTFDEQSEGLDEKKLEAMRLYCFEDQSILTEDPWTTASTSTKDLYPLHLDSSYLEKRNH 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01669 981 CDD STKc_IRAK 649 916 - -
Aip08g01669 981 ProSitePatterns Serine/Threonine protein kinases active-site signature. 765 777 IPR008271 GO:0004672|GO:0006468
Aip08g01669 981 Gene3D Ribonuclease Inhibitor 36 203 IPR032675 -
Aip08g01669 981 Gene3D - 402 577 - -
Aip08g01669 981 Gene3D Transferase(Phosphotransferase) domain 1 719 926 - -
Aip08g01669 981 Pfam Protein kinase domain 645 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01669 981 SMART serkin_6 643 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01669 981 ProSiteProfiles Protein kinase domain profile. 643 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01669 981 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 404 932 - -
Aip08g01669 981 Gene3D Ribonuclease Inhibitor 204 280 IPR032675 -
Aip08g01669 981 SUPERFAMILY L domain-like 86 348 - -
Aip08g01669 981 Gene3D Phosphorylase Kinase; domain 1 611 718 - -
Aip08g01669 981 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 404 932 - -
Aip08g01669 981 SUPERFAMILY Protein kinase-like (PK-like) 617 916 IPR011009 -
Aip08g01669 981 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 83 300 - -
Aip08g01669 981 Pfam Malectin domain 436 571 IPR021720 -
Aip08g01669 981 Gene3D Ribonuclease Inhibitor 281 381 IPR032675 -
Aip08g01669 981 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 83 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01669 Aip-Chr8 33023689 33043628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01669 27 940 Receptor kinase-like Gene Family AT1G53420 55.340 0.0 971
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g01669 PK_Tyr_Ser-Thr 8.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01669 - - gmx:732563 1196.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01669 08 33023689 33043628 Aip08g01669 08 33023689 33043628 ECH